miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37422_dwi-mir-12:mirbase
Length = 74
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>36357_dme-mir-12:mirbase
Length = 74
Score = 131 bits (66), Expect = 7e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgccttaaatccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>36358_dme-mir-12:mirbase
Length = 74
Score = 131 bits (66), Expect = 7e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgccttaaatccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>36171_der-mir-12:mirbase
Length = 74
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgccttaaaaccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>36842_dpe-mir-12:mirbase
Length = 74
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1 tacggctgagtattacatcaggtactggtgtgctttaaatccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
|||||||||||||
Sbjct: 61 tatactacgccgtg 74
>36918_dps-mir-12:mirbase
Length = 74
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1 tacggctgagtattacatcaggtactggtgtgctttaaatccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
|||||||||||||
Sbjct: 61 tatactacgccgtg 74
>36259_dgr-mir-12:mirbase
Length = 74
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| |||||||||||||||||||||||||||| || | ||||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgccatttaaccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>37131_dse-mir-12:mirbase
Length = 74
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgcctgaaatccaacaaccagtacttgtgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>37207_dsi-mir-12:mirbase
Length = 74
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgcctgaaatccaacaaccagtacttgtgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>37345_dvi-mir-12:mirbase
Length = 74
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| |||||||||||||||||||||||||||| || | | ||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgccatttaactaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>36769_dmo-mir-12:mirbase
Length = 74
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| |||||||||||||||||||||||||||| | | | ||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgccaattaactaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>35179_aae-mir-12:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 ctgagtattacatcaggtactggtgt 31
||||||||||||||||||||||||||
Sbjct: 7 ctgagtattacatcaggtactggtgt 32
>35280_aga-mir-12:mirbase
Length = 117
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggtgtg 32
||||||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggtgtg 32
>35351_ame-mir-12:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggtgtg 32
||||||||||||||||||||||||||
Sbjct: 13 tgagtattacatcaggtactggtgtg 38
>36010_cqu-mir-12:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggtgt 31
|||||||||||||||||||||||||
Sbjct: 66 tgagtattacatcaggtactggtgt 90
>37605_nlo-mir-12:mirbase
Length = 64
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggtgt 31
|||||||||||||||||||||||||
Sbjct: 6 tgagtattacatcaggtactggtgt 30
>37638_nvi-mir-12:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggtgt 31
|||||||||||||||||||||||||
Sbjct: 13 tgagtattacatcaggtactggtgt 37
>34965_isc-mir-12:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 ctgagtattacatcaggtactggt 29
||||||||||||||||||||||||
Sbjct: 20 ctgagtattacatcaggtactggt 43
>35002_dpu-mir-12:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggt 29
|||||||||||||||||||||||
Sbjct: 21 tgagtattacatcaggtactggt 43
>37709_tca-mir-12:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggt 29
|||||||||||||||||||||||
Sbjct: 16 tgagtattacatcaggtactggt 38
>37710_tca-mir-12:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggt 29
|||||||||||||||||||||||
Sbjct: 16 tgagtattacatcaggtactggt 38
>38734_cte-mir-12:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctgagtattacatcaggtactg 27
||||||||||||||||||||||
Sbjct: 20 ctgagtattacatcaggtactg 41
>38854_lgi-mir-12:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactg 27
|||||||||||||||||||||
Sbjct: 21 tgagtattacatcaggtactg 41
>35525_bmo-mir-12:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 ctgagtattacatcaggtactggt 29
||||||||||| ||||||||||||
Sbjct: 3 ctgagtattacttcaggtactggt 26
