miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36177_der-mir-31b:mirbase
Length = 127
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcgagc 44
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagcggatcgagc 54
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 aaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||
Sbjct: 89 aaagcggctatgcctcatctagtcaat 115
>37137_dse-mir-31b:mirbase
Length = 127
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcgagc 44
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagcggatcgagc 54
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 aaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||
Sbjct: 89 aaagcggctatgcctcatctagtcaat 115
>37213_dsi-mir-31b:mirbase
Length = 127
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcgagc 44
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagcggatcgagc 54
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 aaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||
Sbjct: 89 aaagcggctatgcctcatctagtcaat 115
>37505_dya-mir-31b:mirbase
Length = 127
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcgagc 44
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagcggatcgagc 54
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 aaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||
Sbjct: 89 aaagcggctatgcctcatctagtcaat 115
>36369_dme-mir-31b:mirbase
Length = 127
Score = 75.8 bits (38), Expect = 5e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcga 42
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagcggatcga 52
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 aaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||
Sbjct: 89 aaagcggctatgcctcatctagtcaat 115
>36370_dme-mir-31b:mirbase
Length = 127
Score = 75.8 bits (38), Expect = 5e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcga 42
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagcggatcga 52
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 aaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||
Sbjct: 89 aaagcggctatgcctcatctagtcaat 115
>36775_dmo-mir-31b:mirbase
Length = 127
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcaca 33
|||||||||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcaca 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 agcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||
Sbjct: 91 agcggctatgcctcatctagtcaat 115
>37351_dvi-mir-31b:mirbase
Length = 126
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcaca 33
|||||||||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcaca 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 agcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaat 114
>36848_dpe-mir-31b:mirbase
Length = 77
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagca 31
|||||||||||||||||||||||||||||||
Sbjct: 1 atttggcaagatgtcggaatagctgagagca 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 gcggctatgcctcatctagtcaat 95
||||||||||||||||||||||||
Sbjct: 52 gcggctatgcctcatctagtcaat 75
>36924_dps-mir-31b:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagca 31
|||||||||||||||||||||||||||||||
Sbjct: 2 atttggcaagatgtcggaatagctgagagca 32
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 gcggctatgcctcatctagtcaat 95
||||||||||||||||||||||||
Sbjct: 53 gcggctatgcctcatctagtcaat 76
>36265_dgr-mir-31b:mirbase
Length = 126
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcaca 33
|||||||||||||||||||||||||| ||||||
Sbjct: 11 atttggcaagatgtcggaatagctgacagcaca 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 agcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaat 114
>37428_dwi-mir-31b:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctga 26
||||||||||||||||||||||||||
Sbjct: 9 atttggcaagatgtcggaatagctga 34
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 cggctatgcctcatctagtcaat 95
|||||||||||||||||||||||
Sbjct: 104 cggctatgcctcatctagtcaat 126
>36098_dan-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36176_der-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36264_dgr-mir-31a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36367_dme-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36368_dme-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36774_dmo-mir-31a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36847_dpe-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36923_dps-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37136_dse-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37212_dsi-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37350_dvi-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37427_dwi-mir-31a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 14 ttggcaagatgtcggcatagctga 37
>37504_dya-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 ttggcaagatgtcggaatagctga 26
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
