miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAPP01016551.1/245474-245363 7217:Drosophila
ananassae
Length = 112
Score = 188 bits (95), Expect = 9e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcgagcgagtcatcgaccgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagaggatcgagcgagtcatcgaccgaga 70
Query: 61 cgaattccaaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||||||||||
Sbjct: 71 cgaattccaaagcggctatgcctcatctagtcaat 105
>RF00661;mir-31;AAPQ01005997.1/12172-12293 7220:Drosophila erecta
Length = 122
Score = 79.8 bits (40), Expect = 6e-15
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcacagaggatcgagc 44
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcacagcggatcgagc 54
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 aaagcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||||
Sbjct: 89 aaagcggctatgcctcatctagtcaat 115
>RF00661;mir-31;AANI01013847.1/25203-25083 7244:Drosophila virilis
Length = 121
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcaca 33
|||||||||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcaca 43
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 agcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaat 114
>RF00661;mir-31;AAPU01009413.1/121752-121873 7230:Drosophila
mojavensis
Length = 122
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcaca 33
|||||||||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagcaca 43
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 agcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||
Sbjct: 91 agcggctatgcctcatctagtcaat 115
>RF00661;mir-31;AAIZ01004624.1/839-930 7234:Drosophila persimilis
Length = 92
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagca 31
|||||||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctgagagca 41
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 gcggctatgcctcatctagtcaat 95
||||||||||||||||||||||||
Sbjct: 62 gcggctatgcctcatctagtcaat 85
>RF00661;mir-31;AAPT01021280.1/172982-172862 7222:Drosophila
grimshawi
Length = 121
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctgagagcaca 33
|||||||||||||||||||||||||| ||||||
Sbjct: 11 atttggcaagatgtcggaatagctgacagcaca 43
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 agcggctatgcctcatctagtcaat 95
|||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaat 114
>RF00661;mir-31;AAQB01010380.1/1470-1604 7260:Drosophila
willistoni
Length = 135
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 atttggcaagatgtcggaatagctga 26
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 cggctatgcctcatctagtcaat 95
|||||||||||||||||||||||
Sbjct: 106 cggctatgcctcatctagtcaat 128
