miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00726;mir-87;AAPP01015726.1/103266-103169 7217:Drosophila
ananassae
Length = 98
Score = 182 bits (92), Expect = 5e-46
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaatccggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaatccggtt 61
Query: 61 gagcaaaatttcaggtgtgtgagaaatttgtt 92
||||||||||||||||||||||||||||||||
Sbjct: 62 gagcaaaatttcaggtgtgtgagaaatttgtt 93
>RF00726;mir-87;AASW01042897.1/1205-1302 7240:Drosophila simulans
Length = 98
Score = 105 bits (53), Expect = 1e-22
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 4 atttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaatccggttgag 63
||||||||||||||||||||||||||||||| | || |||||| | |||||||||||
Sbjct: 5 atttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccggttgag 64
Query: 64 caaaatttcaggtgtgtgagaaatttgtt 92
|||||||||||||||||||||||| ||||
Sbjct: 65 caaaatttcaggtgtgtgagaaatgtgtt 93
>RF00726;mir-87;AAQB01006452.1/3553-3454 7260:Drosophila
willistoni
Length = 100
Score = 99.6 bits (50), Expect = 6e-21
Identities = 83/93 (89%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaa--tccgg 58
||||||||||||||||||||||||||||||||||||||| || | || | |||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcatcatttccgg 61
Query: 59 ttgagcaaaatttcaggtgtgtgagaaatttgt 91
|||||||||||||||||||||||||||||||||
Sbjct: 62 ttgagcaaaatttcaggtgtgtgagaaatttgt 94
>RF00726;mir-87;AAPU01010611.1/255409-255311 7230:Drosophila
mojavensis
Length = 99
Score = 97.6 bits (49), Expect = 2e-20
Identities = 81/90 (90%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 5 tttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacag---aatccggttg 61
|||||||||||||||||||||||||||||||||| | || |||| ||||||||||
Sbjct: 6 tttcattcgcgcctgtatcttgctgaaccgttac--aattgtcacatccaaatccggttg 63
Query: 62 agcaaaatttcaggtgtgtgagaaatttgt 91
||||||||||||||||||||||||||||||
Sbjct: 64 agcaaaatttcaggtgtgtgagaaatttgt 93
>RF00726;mir-87;AADE01000150.1/47415-47513 46245:Drosophila
pseudoobscura pseudoobscura
Length = 99
Score = 81.8 bits (41), Expect = 1e-15
Identities = 81/93 (87%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaatcc-ggt 59
||||||||||||||||||||||||||||||||||| || |||| |||| |||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggt 61
Query: 60 tgagcaaaatttcaggtgtgtgagaaatttgtt 92
|||||||||||||||||||||||||||||||||
Sbjct: 62 tgagcaaaatttcaggtgtgtgagaaatttgtt 94
