miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36272_dgr-mir-100:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>36184_der-mir-100:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>36383_dme-mir-100:mirbase
Length = 100
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>36384_dme-mir-100:mirbase
Length = 100
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>36782_dmo-mir-100:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>37144_dse-mir-100:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>37219_dsi-mir-100:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>37358_dvi-mir-100:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>37437_dwi-mir-100:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>37512_dya-mir-100:mirbase
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>36855_dpe-mir-100-1:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>36856_dpe-mir-100-2:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>36932_dps-mir-100:mirbase
Length = 100
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60
Query: 61 attatgggagtctgtcaatgca 82
||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82
>25755_xtr-mir-100:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgctgt 37
||||||||| |||||||||||||||||
Sbjct: 9 aaacccgtagatccgaacttgtgctgt 35
>35288_aga-mir-100:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 gaaacccgtaaatccgaacttgtgctg 36
|||||||||| ||||||||||||||||
Sbjct: 13 gaaacccgtagatccgaacttgtgctg 39
>31827_mmu-mir-100:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgctg 36
||||||||| ||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtgctg 37
>32708_rno-mir-100:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgctg 36
||||||||| ||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtgctg 37
>33958_ssc-mir-100:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgctg 36
||||||||| ||||||||||||||||
Sbjct: 15 aaacccgtagatccgaacttgtgctg 40
>26440_tgu-mir-100-1:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgct 35
||||||||| |||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtgct 34
>26441_tgu-mir-100-2:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgct 35
||||||||| |||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtgct 34
>35190_aae-mir-100:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aacccgtaaatccgaacttgtgctg 36
|||||||| ||||||||||||||||
Sbjct: 31 aacccgtagatccgaacttgtgctg 55
>36020_cqu-mir-100:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aacccgtaaatccgaacttgtgctg 36
|||||||| ||||||||||||||||
Sbjct: 23 aacccgtagatccgaacttgtgctg 47
>27501_age-mir-100:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39
>27563_lla-mir-100:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39
>27610_sla-mir-100:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39
>38866_lgi-mir-100:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 20 aaacccgtagatccgaacttgtg 42
>24672_bfl-mir-100:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 20 aaacccgtagatccgaacttgtg 42
>25468_pma-mir-100a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 16 aaacccgtagatccgaacttgtg 38
>25470_pma-mir-100c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 71 aaacccgtagatccgaacttgtg 49
>25930_gga-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>27364_mdo-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>27704_mml-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>28293_ggo-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>28414_hsa-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>30080_ppa-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>30198_ptr-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>30803_ppy-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>31471_oan-mir-100:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 13 aaacccgtagatccgaacttgtg 35
>33187_bta-mir-100:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>34263_dre-mir-100-1:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 23 aaacccgtagatccgaacttgtg 45
>34264_dre-mir-100-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32
>34579_fru-mir-100:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 4 aaacccgtagatccgaacttgtg 26
>34726_tni-mir-100:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 4 aaacccgtagatccgaacttgtg 26
>34877_sko-mir-100:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aaacccgtaaatccgaacttgtg 33
||||||||| |||||||||||||
Sbjct: 20 aaacccgtagatccgaacttgtg 42
>35537_bmo-mir-100:mirbase
Length = 142
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 aacccgtaaatccgaacttgtgc 34
|||||||| ||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgc 43
