miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36192_der-mir-263b:mirbase
Length = 89
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 2 gctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttct 61
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggttct 62
Query: 62 gcgggtgccaaaatt 76
|||||||||||||||
Sbjct: 63 gcgggtgccaaaatt 77
>37520_dya-mir-263b-1:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 tgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttc 60
Query: 61 tgcgggtgccaaaatt 76
||||||||||||||||
Sbjct: 61 tgcgggtgccaaaatt 76
>37521_dya-mir-263b-2:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 tgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttc 60
Query: 61 tgcgggtgccaaaatt 76
||||||||||||||||
Sbjct: 61 tgcgggtgccaaaatt 76
>36407_dme-mir-263b:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 tgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttc 61
Query: 61 tgcgggtgccaaaa 74
||||||||||||||
Sbjct: 62 tgcgggtgccaaaa 75
>36408_dme-mir-263b:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 tgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttc 61
Query: 61 tgcgggtgccaaaa 74
||||||||||||||
Sbjct: 62 tgcgggtgccaaaa 75
>37152_dse-mir-263b:mirbase
Length = 90
Score = 115 bits (58), Expect = 5e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||| |||||| |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 2 tgctgactttgagtcttggcactgggagaattcacagttgacttgattattctgtggttc 61
Query: 61 tgcgggtgccaaaa 74
||||||||||||||
Sbjct: 62 tgcgggtgccaaaa 75
>37231_dsi-mir-263b:mirbase
Length = 90
Score = 115 bits (58), Expect = 5e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||| |||||| |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 2 tgctgactttgagtcttggcactgggagaattcacagttgacttgattattctgtggttc 61
Query: 61 tgcgggtgccaaaa 74
||||||||||||||
Sbjct: 62 tgcgggtgccaaaa 75
>36281_dgr-mir-263b:mirbase
Length = 75
Score = 87.7 bits (44), Expect = 1e-18
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 13 atcttggcactgggagaattcacagttgattttat--tattctgtggttctgcgggtgcc 70
|||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 7 atcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcc 66
Query: 71 aaa 73
|||
Sbjct: 67 aaa 69
>37445_dwi-mir-263b:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 5e-18
Identities = 63/68 (92%), Gaps = 5/68 (7%)
Strand = Plus / Plus
Query: 13 atcttggcactgggagaattcacagttgatt-ttat----tattctgtggttctgcgggt 67
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 60
Query: 68 gccaaaat 75
||||||||
Sbjct: 61 gccaaaat 68
>37366_dvi-mir-263b:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/65 (92%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 13 atcttggcactgggagaattcacagttgattttat--tattctgtggttctgcgggtgcc 70
|||||||||||||||||||||||||| |||| || |||||||||||||||||||||||
Sbjct: 4 atcttggcactgggagaattcacagtcgattacataatattctgtggttctgcgggtgcc 63
Query: 71 aaaat 75
|||||
Sbjct: 64 aaaat 68
>36945_dps-mir-263b:mirbase
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 60/64 (93%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 14 tcttggcactgggagaattcacagttgatttt-at-tattctgtggttctgcgggtgcca 71
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
Query: 72 aaat 75
||||
Sbjct: 75 aaat 78
>36866_dpe-mir-263b:mirbase
Length = 92
Score = 77.8 bits (39), Expect = 1e-15
Identities = 56/59 (94%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 14 tcttggcactgggagaattcacagttgatttt-at-tattctgtggttctgcgggtgcc 70
||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggttttcatatattctgtggttctgcgggtgcc 73
>35298_aga-mir-263b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacagt 38
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>35203_aae-mir-263b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35546_bmo-mir-263b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35378_ame-mir-263b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactgggagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 15 tcttggcactggaagaattcacag 38
>37585_ngi-mir-263b:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactgggagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 14 tcttggcactggaagaattcacag 37
>37616_nlo-mir-263b:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactgggagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 14 tcttggcactggaagaattcacag 37
>37658_nvi-mir-263b:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactgggagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 9 tcttggcactggaagaattcacag 32
