miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAPP01019315.1/707685-707774 7217:Drosophila
ananassae
Length = 90
Score = 176 bits (89), Expect = 3e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 61
Query: 61 tgcgggtgccaaaattgaaataatggcct 89
|||||||||||||||||||||||||||||
Sbjct: 62 tgcgggtgccaaaattgaaataatggcct 90
>RF00706;mir-263;AAPQ01006581.1/272485-272396 7220:Drosophila
erecta
Length = 90
Score = 133 bits (67), Expect = 4e-31
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 2 gctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttct 61
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggttct 62
Query: 62 gcgggtgccaaaatt 76
|||||||||||||||
Sbjct: 63 gcgggtgccaaaatt 77
>RF00706;mir-263;AAKO01000155.1/113509-113420 7238:Drosophila
sechellia
Length = 90
Score = 115 bits (58), Expect = 1e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 60
||||| |||||| |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 2 tgctgactttgagtcttggcactgggagaattcacagttgacttgattattctgtggttc 61
Query: 61 tgcgggtgccaaaa 74
||||||||||||||
Sbjct: 62 tgcgggtgccaaaa 75
>RF00706;mir-263;AAQB01006546.1/140884-140979 7260:Drosophila
willistoni
Length = 96
Score = 85.7 bits (43), Expect = 9e-17
Identities = 63/68 (92%), Gaps = 5/68 (7%)
Strand = Plus / Plus
Query: 13 atcttggcactgggagaattcacagttgatt-ttat----tattctgtggttctgcgggt 67
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 14 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 73
Query: 68 gccaaaat 75
||||||||
Sbjct: 74 gccaaaat 81
>RF00706;mir-263;AANI01017489.1/74722-74633 7244:Drosophila
virilis
Length = 90
Score = 83.8 bits (42), Expect = 3e-16
Identities = 60/65 (92%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 13 atcttggcactgggagaattcacagttgattttat--tattctgtggttctgcgggtgcc 70
|||||||||||||||||||||||||| |||| || |||||||||||||||||||||||
Sbjct: 13 atcttggcactgggagaattcacagtcgattacataatattctgtggttctgcgggtgcc 72
Query: 71 aaaat 75
|||||
Sbjct: 73 aaaat 77
>RF00706;mir-263;AAFS01001003.1/35414-35505 46245:Drosophila
pseudoobscura pseudoobscura
Length = 92
Score = 79.8 bits (40), Expect = 5e-15
Identities = 60/64 (93%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 14 tcttggcactgggagaattcacagttgatttt-at-tattctgtggttctgcgggtgcca 71
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
Query: 72 aaat 75
||||
Sbjct: 75 aaat 78
>RF00706;mir-263;ABKP02026803.1/39465-39371 377271:Anopheles
gambiae M
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacagt 38
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>RF00706;mir-263;ABLF01012668.1/9002-8913 7029:Acyrthosiphon pisum
(pea aphid)
Length = 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 gaatcttggcactgggagaattcacag 37
||||||||||||||| |||||||||||
Sbjct: 12 gaatcttggcactggaagaattcacag 38
>RF00706;mir-263;AADK01025663.1/3361-3450 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAGE02001908.1/33266-33358 7159:Aedes aegypti
(yellow fever mosquito)
Length = 93
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
