miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00822;mir-274;AAPP01019289.1/330187-330287 7217:Drosophila
ananassae
Length = 101
Score = 190 bits (96), Expect = 2e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tgttgcagtttcgttttgtgaccgacactaacgggtattttacaggacatacaggattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tgttgcagtttcgttttgtgaccgacactaacgggtattttacaggacatacaggattac 65
Query: 61 tcgtttttgcgatcacaaatcctgaaattgcagcaa 96
||||||||||||||||||||||||||||||||||||
Sbjct: 66 tcgtttttgcgatcacaaatcctgaaattgcagcaa 101
>RF00822;mir-274;AAKO01000079.1/37948-38047 7238:Drosophila
sechellia
Length = 100
Score = 103 bits (52), Expect = 4e-22
Identities = 86/96 (89%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 tgttgcagtttcgttttgtgaccgacactaacgggtattttacaggacatacaggattac 60
||||||||||||||||||||||||||||||||||||| || | || |||||||||
Sbjct: 6 tgttgcagtttcgttttgtgaccgacactaacgggtaattgtttgatcac-caggattac 64
Query: 61 tcgtttttgcgatcacaaatcctgaaattgcagcaa 96
||||||||||||||||||||| ||||||||||||||
Sbjct: 65 tcgtttttgcgatcacaaatcatgaaattgcagcaa 100
>RF00822;mir-274;AAQB01007682.1/34817-34703 7260:Drosophila
willistoni
Length = 115
Score = 71.9 bits (36), Expect = 1e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 57 ttactcgtttttgcgatcacaaatcctgaaattgcagcaa 96
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 76 ttactcgtttttgcgatcacaaattctgaaattgcagcaa 115
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 tgttgcagtttcgttttgtgaccgacactaacgggta 37
|||||||||||| ||||||||||||||||||||||||
Sbjct: 6 tgttgcagtttcattttgtgaccgacactaacgggta 42
>RF00822;mir-274;AAPT01020611.1/127253-127143 7222:Drosophila
grimshawi
Length = 111
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 tgttgcagtttcgttttgtgaccgacactaacgggta 37
||||||||||||| |||||||||||||||||||||||
Sbjct: 6 tgttgcagtttcggtttgtgaccgacactaacgggta 42
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 57 ttactcgtttttgcgatcacaaatcctgaaattgca 92
|||||||||||||||||||||||| |||||||||||
Sbjct: 72 ttactcgtttttgcgatcacaaattctgaaattgca 107
>RF00822;mir-274;AAPU01011627.1/22605-22713 7230:Drosophila
mojavensis
Length = 109
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 tgttgcagtttcgttttgtgaccgacactaacgggta 37
||||||||||||| |||||||||||||||||||||||
Sbjct: 6 tgttgcagtttcggtttgtgaccgacactaacgggta 42
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaatcctgaaattgca 92
||||||||||||||||||||||| |||||||||||
Sbjct: 71 tactcgtttttgcgatcacaaattctgaaattgca 105
>RF00822;mir-274;AANI01017486.1/215294-215400 7244:Drosophila
virilis
Length = 107
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 tgttgcagtttcgttttgtgaccgacactaacgggta 37
||||||||||||| |||||||||||||||||||||||
Sbjct: 6 tgttgcagtttcggtttgtgaccgacactaacgggta 42
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 57 ttactcgtttttgcgatcacaaatcctgaaattgca 92
|||||||||||||||||||||||| |||||||||||
Sbjct: 68 ttactcgtttttgcgatcacaaattctgaaattgca 103
>RF00822;mir-274;AADE01002814.1/8876-8780 46245:Drosophila
pseudoobscura pseudoobscura
Length = 97
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 tgcagtttcgttttgtgaccgacactaacgggta 37
||||||||| ||||||||||||||||||||||||
Sbjct: 9 tgcagtttcattttgtgaccgacactaacgggta 42
