miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00801;mir-280;AAPP01018712.1/27830-27743 7217:Drosophila
ananassae
Length = 88
Score = 157 bits (79), Expect = 2e-38
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
Query: 61 atgcaggtatatgcaagcc 79
|||||||||||||||||||
Sbjct: 61 atgcaggtatatgcaagcc 79
>RF00801;mir-280;AAQB01006287.1/166688-166782 7260:Drosophila
willistoni
Length = 95
Score = 143 bits (72), Expect = 4e-34
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
Query: 61 atgcaggtatatgcaa 76
|||||||||| |||||
Sbjct: 61 atgcaggtatgtgcaa 76
>RF00801;mir-280;AAPT01021476.1/37912-38002 7222:Drosophila
grimshawi
Length = 91
Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
Query: 61 atgcaggtata 71
|||||||||||
Sbjct: 61 atgcaggtata 71
>RF00801;mir-280;AANI01014841.1/76079-76175 7244:Drosophila
virilis
Length = 97
Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttat 60
Query: 61 atgcaggtata 71
|||||||||||
Sbjct: 61 atgcaggtata 71
>RF00801;mir-280;AAPU01010189.1/60454-60360 7230:Drosophila
mojavensis
Length = 95
Score = 137 bits (69), Expect = 2e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 3 gcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttatat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttatat 62
Query: 63 gcaggtata 71
|||||||||
Sbjct: 63 gcaggtata 71
