miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36201_der-mir-281-1:mirbase
Length = 90
Score = 113 bits (57), Expect = 2e-26
Identities = 82/90 (91%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagatacc----tataacactgt 56
|||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagaaaccatttaatatcactgt 60
Query: 57 catggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||||
Sbjct: 61 catggaattgctctctttgtataatattcg 90
>37161_dse-mir-281-1:mirbase
Length = 90
Score = 113 bits (57), Expect = 2e-26
Identities = 82/90 (91%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagatacc----tataacactgt 56
|||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagaaaccatttaatatcactgt 60
Query: 57 catggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||||
Sbjct: 61 catggaattgctctctttgtataatattcg 90
>36424_dme-mir-281-1:mirbase
Length = 90
Score = 105 bits (53), Expect = 5e-24
Identities = 81/90 (90%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagatac----ctataacactgt 56
|||||| |||||||||||||||||||||||||||||||||| || ||| ||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagaaactatttaatatcactgt 60
Query: 57 catggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||||
Sbjct: 61 catggaattgctctctttgtataatattcg 90
>36425_dme-mir-281-1:mirbase
Length = 90
Score = 105 bits (53), Expect = 5e-24
Identities = 81/90 (90%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagatac----ctataacactgt 56
|||||| |||||||||||||||||||||||||||||||||| || ||| ||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagaaactatttaatatcactgt 60
Query: 57 catggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||||
Sbjct: 61 catggaattgctctctttgtataatattcg 90
>36875_dpe-mir-281-1:mirbase
Length = 88
Score = 105 bits (53), Expect = 5e-24
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagatacctat--aacactgtca 58
|||||| |||||||||||||||||||||||||||||| | |||| || || |||||||
Sbjct: 1 cgaataggtgaataaagagagctgtccgtcgacagtcaacgtaccaatttaatactgtca 60
Query: 59 tggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||
Sbjct: 61 tggaattgctctctttgtataatattcg 88
>36955_dps-mir-281-1:mirbase
Length = 88
Score = 105 bits (53), Expect = 5e-24
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagatacctat--aacactgtca 58
|||||| |||||||||||||||||||||||||||||| | |||| || || |||||||
Sbjct: 1 cgaataggtgaataaagagagctgtccgtcgacagtcaacgtaccaatttaatactgtca 60
Query: 59 tggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||
Sbjct: 61 tggaattgctctctttgtataatattcg 88
>37238_dsi-mir-281:mirbase
Length = 90
Score = 105 bits (53), Expect = 5e-24
Identities = 81/90 (90%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagatacc----tataacactgt 56
|||||| |||||||||||||||||||||||||||||||||| | | ||| ||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagaaagcatttaatatcactgt 60
Query: 57 catggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||||
Sbjct: 61 catggaattgctctctttgtataatattcg 90
>37530_dya-mir-281-1:mirbase
Length = 90
Score = 103 bits (52), Expect = 2e-23
Identities = 82/90 (91%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccag-atacct---ataacactgt 56
|||||| ||||||||||||||||||||||||||||||||| || | | ||| ||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagaattcatttaatatcactgt 60
Query: 57 catggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||||
Sbjct: 61 catggaattgctctctttgtataatattcg 90
>37375_dvi-mir-281-1:mirbase
Length = 88
Score = 97.6 bits (49), Expect = 1e-21
Identities = 79/88 (89%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccag--atacctataacactgtca 58
|||||| ||||||||||||||||||||||||||||||||| | | | ||| |||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagtaacaaatgtaatactgtca 60
Query: 59 tggaattgctctctttgtataatattcg 86
|||||||||||||||||||| |||||||
Sbjct: 61 tggaattgctctctttgtatgatattcg 88
>36290_dgr-mir-281-1:mirbase
Length = 88
Score = 95.6 bits (48), Expect = 5e-21
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccag-at-acctataacactgtca 58
|||||| ||||||||||||||||||||||||||||||||| || | | ||| |||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagtataaattttaatactgtca 60
Query: 59 tggaattgctctctttgtataatattcg 86
|||||||||||||||||||| |||||||
Sbjct: 61 tggaattgctctctttgtatgatattcg 88
>36798_dmo-mir-281-1:mirbase
Length = 88
Score = 89.7 bits (45), Expect = 3e-19
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccag--atacctataacactgtca 58
|||||| ||||||||||||||||||||||||||||||||| | | ||| |||||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagtaaagattgtaaaactgtca 60
Query: 59 tggaattgctctctttgtataatattcg 86
|||||||||||||||||||| |||||||
Sbjct: 61 tggaattgctctctttgtatgatattcg 88
>37454_dwi-mir-281-1:mirbase
Length = 90
Score = 89.7 bits (45), Expect = 3e-19
Identities = 79/90 (87%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 1 cgaatacgtgaataaagagagctgtccgtcgacagtccagata----cctataacactgt 56
|||||| ||||||||||||||||||||||||||||||||| || | ||| |||||
Sbjct: 1 cgaataagtgaataaagagagctgtccgtcgacagtccagttaaacgattttaaaactgt 60
Query: 57 catggaattgctctctttgtataatattcg 86
|||||||||||||||||||||| |||||||
Sbjct: 61 catggaattgctctctttgtatgatattcg 90
>36291_dgr-mir-281-2:mirbase
Length = 93
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 59 actgtcatggaattgctctctttgtataatattcg 93
>36799_dmo-mir-281-2:mirbase
Length = 93
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 59 actgtcatggaattgctctctttgtataatattcg 93
>36876_dpe-mir-281-2:mirbase
Length = 91
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 57 actgtcatggaattgctctctttgtataatattcg 91
>36956_dps-mir-281-2:mirbase
Length = 91
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 57 actgtcatggaattgctctctttgtataatattcg 91
>37376_dvi-mir-281-2:mirbase
Length = 91
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 57 actgtcatggaattgctctctttgtataatattcg 91
>37455_dwi-mir-281-2:mirbase
Length = 97
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 63 actgtcatggaattgctctctttgtataatattcg 97
>37531_dya-mir-281-2:mirbase
Length = 92
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
|||||||||||||||||||||||||||||||||||
Sbjct: 58 actgtcatggaattgctctctttgtataatattcg 92
>36124_dan-mir-281-2:mirbase
Length = 94
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 60 actgtcatggaattgctctctttgtataacattcg 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 aagagagctgtccgtcgacagtc 37
||||||||| |||||||||||||
Sbjct: 15 aagagagctatccgtcgacagtc 37
>36202_der-mir-281-2:mirbase
Length = 92
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 58 actgtcatggaattgctctctttgtataacattcg 92
>36426_dme-mir-281-2:mirbase
Length = 92
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 58 actgtcatggaattgctctctttgtataacattcg 92
>36427_dme-mir-281-2:mirbase
Length = 92
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 58 actgtcatggaattgctctctttgtataacattcg 92
>37162_dse-mir-281-2:mirbase
Length = 92
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctttgtataatattcg 86
||||||||||||||||||||||||||||| |||||
Sbjct: 58 actgtcatggaattgctctctttgtataacattcg 92
>35305_aga-mir-281:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 55/64 (85%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 11 aataaagagagctgtccgtcgacagtccagatacctataacactgtcatggaattgctct 70
||||||||||||| |||||||||||| |||| || ||||||||||||||||||||
Sbjct: 16 aataaagagagctatccgtcgacagtagggata--taattcactgtcatggaattgctct 73
Query: 71 cttt 74
||||
Sbjct: 74 cttt 77
>35210_aae-mir-281:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 51 cactgtcatggaattgctctcttt 74
||||||||||||||||||||||||
Sbjct: 55 cactgtcatggaattgctctcttt 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aataaagagagctgtccgtcgacagt 36
||||||||||||| ||||||||||||
Sbjct: 17 aataaagagagctatccgtcgacagt 42
>35386_ame-mir-281:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 50 acactgtcatggaattgctctctttgta 77
||||||||||||| ||||||||||||||
Sbjct: 57 acactgtcatggagttgctctctttgta 84
>36038_cqu-mir-281:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 51 cactgtcatggaattgctctcttt 74
||||||||||||||||||||||||
Sbjct: 60 cactgtcatggaattgctctcttt 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aataaagagagctgtccgtcgacagt 36
||||||||||||| ||||||||||||
Sbjct: 22 aataaagagagctatccgtcgacagt 47
>37589_ngi-mir-281:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 acactgtcatggaattgctctctttgt 76
||||||||||||| |||||||||||||
Sbjct: 43 acactgtcatggacttgctctctttgt 69
>37620_nlo-mir-281:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 acactgtcatggaattgctctctttgt 76
||||||||||||| |||||||||||||
Sbjct: 43 acactgtcatggacttgctctctttgt 69
>37663_nvi-mir-281:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 acactgtcatggaattgctctctttgt 76
||||||||||||| |||||||||||||
Sbjct: 57 acactgtcatggacttgctctctttgt 83
>38122_bma-mir-281:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctcttt 74
|||||||||||||||||||||||
Sbjct: 51 actgtcatggaattgctctcttt 73
>24703_bfl-mir-281:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 aacactgtcatggaattgctctcttt 74
|||||||||||||| |||||||||||
Sbjct: 54 aacactgtcatggagttgctctcttt 79
>25355_odi-mir-281:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctctt 73
||||||||||||||||||||||
Sbjct: 64 actgtcatggaattgctctctt 85
>35557_bmo-mir-281:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 aacactgtcatggaattgctctcttt 74
|||||||||||||| |||||||||||
Sbjct: 43 aacactgtcatggagttgctctcttt 68
>35081_api-mir-281:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 acactgtcatggaattgctctcttt 74
||||||||||||| |||||||||||
Sbjct: 36 acactgtcatggagttgctctcttt 60
>37781_tca-mir-281:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 acactgtcatggaattgctctcttt 74
||||||||||||| |||||||||||
Sbjct: 41 acactgtcatggagttgctctcttt 65
>37782_tca-mir-281:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 acactgtcatggaattgctctcttt 74
||||||||||||| |||||||||||
Sbjct: 41 acactgtcatggagttgctctcttt 65
>38884_lgi-mir-281:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctcttt 74
||||||||||| |||||||||||
Sbjct: 59 actgtcatggagttgctctcttt 81
>37566_lmi-mir-281:mirbase
Length = 58
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 52 actgtcatggaattgctctcttt 74
||||||||||| |||||||||||
Sbjct: 34 actgtcatggagttgctctcttt 56
