miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36202_der-mir-281-2:mirbase
Length = 92
Score = 141 bits (71), Expect = 1e-34
Identities = 89/94 (94%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaatacc--gattgtaata 58
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||||||||
Sbjct: 59 ctgtcatggaattgctctctttgtataacattcg 92
>36426_dme-mir-281-2:mirbase
Length = 92
Score = 141 bits (71), Expect = 1e-34
Identities = 89/94 (94%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagacc--gattgtaata 58
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||||||||
Sbjct: 59 ctgtcatggaattgctctctttgtataacattcg 92
>36427_dme-mir-281-2:mirbase
Length = 92
Score = 141 bits (71), Expect = 1e-34
Identities = 89/94 (94%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagacc--gattgtaata 58
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||||||||
Sbjct: 59 ctgtcatggaattgctctctttgtataacattcg 92
>37162_dse-mir-281-2:mirbase
Length = 92
Score = 141 bits (71), Expect = 1e-34
Identities = 89/94 (94%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagacc--gattgtaata 58
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||||||||
Sbjct: 59 ctgtcatggaattgctctctttgtataacattcg 92
>37531_dya-mir-281-2:mirbase
Length = 92
Score = 133 bits (67), Expect = 2e-32
Identities = 88/94 (93%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaatacca--attgtaata 58
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
|||||||||||||||||||||||||||| |||||
Sbjct: 59 ctgtcatggaattgctctctttgtataatattcg 92
>36291_dgr-mir-281-2:mirbase
Length = 93
Score = 131 bits (66), Expect = 1e-31
Identities = 88/94 (93%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||||| ||||||||||||||||||||||||||||||||||| | || ||||||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatat-accgattgtaata 59
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
|||||||||||||||||||||||||||| |||||
Sbjct: 60 ctgtcatggaattgctctctttgtataatattcg 93
>36876_dpe-mir-281-2:mirbase
Length = 91
Score = 127 bits (64), Expect = 2e-30
Identities = 87/94 (92%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaat---cagattgtaata 57
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
|||||||||||||||||||||||||||| |||||
Sbjct: 58 ctgtcatggaattgctctctttgtataatattcg 91
>36956_dps-mir-281-2:mirbase
Length = 91
Score = 127 bits (64), Expect = 2e-30
Identities = 87/94 (92%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaat---cagattgtaata 57
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
|||||||||||||||||||||||||||| |||||
Sbjct: 58 ctgtcatggaattgctctctttgtataatattcg 91
>37376_dvi-mir-281-2:mirbase
Length = 91
Score = 119 bits (60), Expect = 4e-28
Identities = 86/94 (91%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||||| |||||||||||||||||||||||||||||||| || | | ||||||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagctata---cagattgtaata 57
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
|||||||||||||||||||||||||||| |||||
Sbjct: 58 ctgtcatggaattgctctctttgtataatattcg 91
>36799_dmo-mir-281-2:mirbase
Length = 93
Score = 115 bits (58), Expect = 6e-27
Identities = 86/94 (91%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
||||||| ||||||||||||||||||||||||||||||||||| | || ||| |||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatat-acatattttaata 59
Query: 61 ctgtcatggaattgctctctttgtataacattcg 94
|||||||||||||||||||||||||||| |||||
Sbjct: 60 ctgtcatggaattgctctctttgtataatattcg 93
>37455_dwi-mir-281-2:mirbase
Length = 97
Score = 115 bits (58), Expect = 6e-27
Identities = 89/97 (91%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaa-aca--cggattgta 57
||||||| ||||||||||||||||||||||||||||| |||| || ||| || ||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
Query: 58 atactgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||||| |||||
Sbjct: 61 atactgtcatggaattgctctctttgtataatattcg 97
>36875_dpe-mir-281-1:mirbase
Length = 88
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 56 taatactgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||||||| |||||
Sbjct: 50 taatactgtcatggaattgctctctttgtataatattcg 88
>36955_dps-mir-281-1:mirbase
Length = 88
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 56 taatactgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||||||| |||||
Sbjct: 50 taatactgtcatggaattgctctctttgtataatattcg 88
>37454_dwi-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/72 (87%), Gaps = 4/72 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaaaacacggattgtaatactgtcatggaattg 74
||||||||| ||||||||||||| ||||||| |||| ||| |||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagttaaac----gattttaaaactgtcatggaattg 70
Query: 75 ctctctttgtat 86
||||||||||||
Sbjct: 71 ctctctttgtat 82
>36798_dmo-mir-281-1:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 5e-12
Identities = 62/72 (86%), Gaps = 6/72 (8%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaaaacacggattgtaatactgtcatggaattg 74
||||||||| ||||||||||||| ||| || |||||||| |||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagtaaa------gattgtaaaactgtcatggaattg 68
Query: 75 ctctctttgtat 86
||||||||||||
Sbjct: 69 ctctctttgtat 80
>37375_dvi-mir-281-1:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 54 tgtaatactgtcatggaattgctctctttgtat 86
|||||||||||||||||||||||||||||||||
Sbjct: 48 tgtaatactgtcatggaattgctctctttgtat 80
>36123_dan-mir-281-1:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||| |||||
Sbjct: 52 actgtcatggaattgctctctttgtataatattcg 86
>36201_der-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36290_dgr-mir-281-1:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 56 taatactgtcatggaattgctctctttgtat 86
|||||||||||||||||||||||||||||||
Sbjct: 50 taatactgtcatggaattgctctctttgtat 80
>36424_dme-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36425_dme-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37161_dse-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37238_dsi-mir-281:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37530_dya-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgtataacattcg 94
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37781_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>37782_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>35557_bmo-mir-281:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 aatgaagagagctatccgtcgacagt 36
||||||||||||||||||||||||||
Sbjct: 7 aatgaagagagctatccgtcgacagt 32
>25355_odi-mir-281:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 aatactgtcatggaattgctctctt 81
|||||||||||||||||||||||||
Sbjct: 61 aatactgtcatggaattgctctctt 85
>35210_aae-mir-281:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 16 aaataaagagagctatccgtcgacagt 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctcttt 82
|||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>35305_aga-mir-281:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 15 aaataaagagagctatccgtcgacagt 41
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctcttt 82
|||||||||||||||||||||||
Sbjct: 55 actgtcatggaattgctctcttt 77
>36038_cqu-mir-281:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 21 aaataaagagagctatccgtcgacagt 47
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctcttt 82
|||||||||||||||||||||||
Sbjct: 61 actgtcatggaattgctctcttt 83
>38122_bma-mir-281:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctcttt 82
|||||||||||||||||||||||
Sbjct: 51 actgtcatggaattgctctcttt 73
>38884_lgi-mir-281:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 aatactgtcatggaattgctctcttt 82
|||||||||||||| |||||||||||
Sbjct: 56 aatactgtcatggagttgctctcttt 81
>35081_api-mir-281:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>35386_ame-mir-281:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgta 85
||||||||||| ||||||||||||||
Sbjct: 59 actgtcatggagttgctctctttgta 84
>37566_lmi-mir-281:mirbase
Length = 58
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>37589_ngi-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgt 84
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37620_nlo-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgt 84
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37663_nvi-mir-281:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 actgtcatggaattgctctctttgt 84
||||||||||| |||||||||||||
Sbjct: 59 actgtcatggacttgctctctttgt 83
