miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00724;mir-282;AE014296.4/3251022-3251116 7227:Drosophila
melanogaster (fruit fly)
Length = 95
Score = 155 bits (78), Expect = 1e-37
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 ttccttatagatctagcctctactaggctttgtctgtgcattcgaaagtcgatcagacat 60
|||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4 ttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagacat 63
Query: 61 agcctataagaggttaggtgtaccaaggcg 90
||||||||||||||||||||||||||||||
Sbjct: 64 agcctataagaggttaggtgtaccaaggcg 93
>RF00724;mir-282;AAPU01011488.1/130621-130527 7230:Drosophila
mojavensis
Length = 95
Score = 111 bits (56), Expect = 2e-24
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 1 ttccttatagatctagcctctactaggctttgtctgtgcattcgaaagtcgatcagacat 60
||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagacat 63
Query: 61 agcctataagaggttaggtgtaccaagg 88
||||||| |||||||||||||| |||||
Sbjct: 64 agcctatgagaggttaggtgtagcaagg 91
>RF00724;mir-282;AAQB01009652.1/11236-11325 7260:Drosophila
willistoni
Length = 90
Score = 93.7 bits (47), Expect = 4e-19
Identities = 77/87 (88%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 2 tccttatagatctagcctctactaggctttgtctgtgcattcgaaagtcgatcagacata 61
|||||||| |||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 5 tccttataaatctagcctctactaggctttgtctgtgcatttgga-----ttcagacata 59
Query: 62 gcctataagaggttaggtgtaccaagg 88
|||||| ||||||||||||||||||||
Sbjct: 60 gcctatgagaggttaggtgtaccaagg 86
>RF00724;mir-282;AAPT01020493.1/70677-70773 7222:Drosophila
grimshawi
Length = 97
Score = 91.7 bits (46), Expect = 1e-18
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 ttccttatagatctagcctctactaggctttgtctgtgca--ttcgaaagtcgatcagac 58
||||||||| |||||||||||||||||||||||||||||| || || || |||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 63
Query: 59 atagcctataagaggttaggtgtac 83
||||||||| |||||||||||||||
Sbjct: 64 atagcctatgagaggttaggtgtac 88
>RF00724;mir-282;AAGE02015805.1/19430-19533 7159:Aedes aegypti
(yellow fever mosquito)
Length = 104
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 atctagcctctactaggctttgtctgt 37
||||||||||| |||||||||||||||
Sbjct: 14 atctagcctctcctaggctttgtctgt 40
>RF00724;mir-282;ABKP02026817.1/6213-6306 377271:Anopheles gambiae
M
Length = 94
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 atctagcctctactaggctttgtctgt 37
||||||||||| |||||||||||||||
Sbjct: 14 atctagcctcttctaggctttgtctgt 40
