miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36205_der-mir-284:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37534_dya-mir-284:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>36879_dpe-mir-284:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>36959_dps-mir-284:mirbase
Length = 100
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37165_dse-mir-284:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
| | ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>37241_dsi-mir-284:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
| | ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36432_dme-mir-284:mirbase
Length = 100
Score = 155 bits (78), Expect = 7e-39
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
| | ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36433_dme-mir-284:mirbase
Length = 100
Score = 155 bits (78), Expect = 7e-39
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
| | ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>37379_dvi-mir-284:mirbase
Length = 98
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
>36294_dgr-mir-284:mirbase
Length = 98
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggc 96
|| |||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
>37458_dwi-mir-284:mirbase
Length = 99
Score = 117 bits (59), Expect = 2e-27
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtga-gggcaaggcttgagaactg 59
|||||||||||||||||||||||||||||||||||||| | ||| |||||||||| | ||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgttaggggaaaggcttgagcattg 60
Query: 60 cttcagaagtcagcaacttgattccagcaattgcggccc 98
| | |||||||||||||||||||||||||||||||||
Sbjct: 61 catactaagtcagcaacttgattccagcaattgcggccc 99
>36802_dmo-mir-284:mirbase
Length = 98
Score = 99.6 bits (50), Expect = 4e-22
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
||||||||||||||||| ||||||||||||| |||||| |||| ||||||| | | |||
Sbjct: 1 gttgcagttcctggaataaagttgactgtgtcgcctgtaaggggaaggcttttgcattgc 60
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||| ||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaactgcggccc 98
