miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01901;mir-284;AASR01017048.1/711-808 7240:Drosophila simulans
          Length = 98

 Score =  163 bits (82), Expect = 5e-40
 Identities = 94/98 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
          |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 1  gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60

                                                
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
          | | ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98




>RF01901;mir-284;AAPU01011034.1/21117-21020 7230:Drosophila
          mojavensis
          Length = 98

 Score = 99.6 bits (50), Expect = 6e-21
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                      
Query: 1  gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
          ||||||||||||||||| ||||||||||||| |||||| |||| |||||||  | | |||
Sbjct: 1  gttgcagttcctggaataaagttgactgtgtcgcctgtaaggggaaggcttttgcattgc 60

                                                
Query: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
          ||   |||||||||||||||||||||||| ||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaactgcggccc 98