miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36206_der-mir-285:mirbase
Length = 98
Score = 121 bits (61), Expect = 1e-28
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 9 aagaactgagatcgattggtgcatagatatcaaggagatccgatcatttcaattctagca 68
|||||||||||||||||||||||||||||||||| || || ||| ||||| |||||||
Sbjct: 9 aagaactgagatcgattggtgcatagatatcaagaagccccactcaattcaactctagca 68
Query: 69 ccattcgaaatcagtgcttttgataagaa 97
|||||||||||||||||||||||||||||
Sbjct: 69 ccattcgaaatcagtgcttttgataagaa 97
>37242_dsi-mir-285:mirbase
Length = 98
Score = 121 bits (61), Expect = 1e-28
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 1 tcgaatcaaagaactgagatcgattggtgcatagatatcaaggagatccgatcatttcaa 60
||||||| |||||||||||||||||||||||||||||||| | | | || ||| |||||
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggaaaacccactcaattcaa 60
Query: 61 ttctagcaccattcgaaatcagtgcttttgataagaa 97
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctagcaccattcgaaatcagtgcttttgataagaa 97
>37535_dya-mir-285:mirbase
Length = 98
Score = 121 bits (61), Expect = 1e-28
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 1 tcgaatcaaagaactgagatcgattggtgcatagatatcaaggagatccgatcatttcaa 60
||||||| |||||||||||||||||||||||||||||||||| | || ||| |||||
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaagacaacccactcaattcaa 60
Query: 61 ttctagcaccattcgaaatcagtgcttttgataagaa 97
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctagcaccattcgaaatcagtgcttttgataagaa 97
>36434_dme-mir-285:mirbase
Length = 99
Score = 115 bits (58), Expect = 6e-27
Identities = 90/98 (91%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1 tcgaatcaaagaactgagatcgattggtgcatagatatcaaggagatccga-tcatttca 59
||||||| ||||||||||||||||||||||||||||||| |||||| || | ||| || |
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatc-aggagaacccactcaattta 59
Query: 60 attctagcaccattcgaaatcagtgcttttgataagaa 97
| ||||||||||||||||||||||||||||||||||||
Sbjct: 60 actctagcaccattcgaaatcagtgcttttgataagaa 97
>36435_dme-mir-285:mirbase
Length = 99
Score = 115 bits (58), Expect = 6e-27
Identities = 90/98 (91%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1 tcgaatcaaagaactgagatcgattggtgcatagatatcaaggagatccga-tcatttca 59
||||||| ||||||||||||||||||||||||||||||| |||||| || | ||| || |
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatc-aggagaacccactcaattta 59
Query: 60 attctagcaccattcgaaatcagtgcttttgataagaa 97
| ||||||||||||||||||||||||||||||||||||
Sbjct: 60 actctagcaccattcgaaatcagtgcttttgataagaa 97
>37166_dse-mir-285:mirbase
Length = 98
Score = 115 bits (58), Expect = 6e-27
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 4 aatcaaagaactgagatcgattggtgcatagatatcaaggagatccgatcatttcaattc 63
|||| |||||||||||||||||||||||||||||||| | | | || ||| ||||| ||
Sbjct: 4 aatcgaagaactgagatcgattggtgcatagatatcaggaaaacccactcaattcaactc 63
Query: 64 tagcaccattcgaaatcagtgcttttgataagaa 97
||||||||||||||||||||||||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgcttttgataagaa 97
>36960_dps-mir-285:mirbase
Length = 100
Score = 109 bits (55), Expect = 4e-25
Identities = 89/99 (89%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 tcgaatcaaagaactgagatcgattggtgcatagatatcaaggagatccgatca-tttca 59
||||||| |||||||||||||||||||||||||||||||||| || || | | |||||
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaagaggactcgctaattttca 60
Query: 60 attctagcaccattcgaaatcagtgcttttgataagaac 98
| ||||||||||||||||||||||||||||||| |||||
Sbjct: 61 actctagcaccattcgaaatcagtgcttttgatgagaac 99
>37380_dvi-mir-285:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 52 tcatttcaattctagcaccattcgaaatcagtgctttt 89
||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tcatttcaattctagcaccattcgaaatcagtgctttt 91
>36803_dmo-mir-285:mirbase
Length = 100
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 54 atttcaattctagcaccattcgaaatcagtgctttt 89
||||||||||||||||||||||||||||||||||||
Sbjct: 57 atttcaattctagcaccattcgaaatcagtgctttt 92
>36295_dgr-mir-285:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 54 atttcaattctagcaccattcgaaatcagtgcttt 88
|||||||||||||||||||||||||||||||||||
Sbjct: 56 atttcaattctagcaccattcgaaatcagtgcttt 90
>37459_dwi-mir-285:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 56 ttcaattctagcaccattcgaaatcagtgctt 87
||||||||||||||||||||||||||||||||
Sbjct: 53 ttcaattctagcaccattcgaaatcagtgctt 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 actgagatcgattggtgcatagata 37
|||||||||||||||||||||||||
Sbjct: 1 actgagatcgattggtgcatagata 25
>24655_bfl-mir-29b:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagtgcttt 88
|||||||||||| ||||||||||||||
Sbjct: 60 tctagcaccatttgaaatcagtgcttt 86
>35214_aae-mir-285:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagt 83
||||||||||||||||||||||
Sbjct: 55 tctagcaccattcgaaatcagt 76
>36040_cqu-mir-285:mirbase
Length = 67
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagt 83
||||||||||||||||||||||
Sbjct: 44 tctagcaccattcgaaatcagt 65
>25453_pma-mir-29c:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 attctagcaccattcgaaatcagtg 84
|||||||||||||| ||||||||||
Sbjct: 51 attctagcaccatttgaaatcagtg 75
>35560_bmo-mir-285:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagtgct 86
|||||||||||||||| ||||||||
Sbjct: 53 tctagcaccattcgaattcagtgct 77
>38736_cte-mir-29b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tagcaccattcgaaatcagtgctt 87
|||||||||| |||||||||||||
Sbjct: 61 tagcaccatttgaaatcagtgctt 84
