miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37536_dya-mir-286:mirbase
Length = 98
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/103 (85%), Gaps = 5/103 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacnnnnnnnttggttaccaac 60
||||||||||||||||| ||||||||||||| |||||||| |||| | | |
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaaga-----ggtttcgatc 55
Query: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 98
>37167_dse-mir-286:mirbase
Length = 99
Score = 87.7 bits (44), Expect = 1e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 60 caagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 caagcgaagtgactagaccgaacactcgtgctataattttaaaa 99
>37243_dsi-mir-286:mirbase
Length = 100
Score = 87.7 bits (44), Expect = 1e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 60 caagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 caagcgaagtgactagaccgaacactcgtgctataattttaaaa 100
>36207_der-mir-286:mirbase
Length = 98
Score = 85.7 bits (43), Expect = 6e-18
Identities = 87/103 (84%), Gaps = 5/103 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacnnnnnnnttggttaccaac 60
||||||||||||||||| ||||||||||||| |||||||| |||| | | |
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaa-----ggtttcgatc 55
Query: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 gagcgaagtgactagaccgaacactcgtgctataattttaaaa 98
>36436_dme-mir-286:mirbase
Length = 100
Score = 85.7 bits (43), Expect = 6e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 99
>36437_dme-mir-286:mirbase
Length = 100
Score = 85.7 bits (43), Expect = 6e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 99
>36880_dpe-mir-286:mirbase
Length = 96
Score = 81.8 bits (41), Expect = 9e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 60 caagcgaagtgactagaccgaacactcgtgctataatttta 100
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 caagcgaagtgactagaccgaacactcgtgctataatttta 93
>36961_dps-mir-286:mirbase
Length = 97
Score = 81.8 bits (41), Expect = 9e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 60 caagcgaagtgactagaccgaacactcgtgctataatttta 100
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 caagcgaagtgactagaccgaacactcgtgctataatttta 93
>36296_dgr-mir-286-1:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgattgtcggtatggtcgctttt 37
|||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36297_dgr-mir-286-2:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgattgtcggtatggtcgctttt 37
|||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36804_dmo-mir-286:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttca 40
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttca 40
>37381_dvi-mir-286:mirbase
Length = 101
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
Score = 71.9 bits (36), Expect = 9e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttca 40
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttca 40
>37460_dwi-mir-286:mirbase
Length = 108
Score = 71.9 bits (36), Expect = 9e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 66 aagtgactagaccgaacactcgtgctataattttaa 101
||||||||||||||||||||||||||||||||||||
Sbjct: 73 aagtgactagaccgaacactcgtgctataattttaa 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 3 aaaattgaatggcgattgtcggtatggtcgctttttc 39
||||||||||||||||||||||||| ||| |||||||
Sbjct: 1 aaaattgaatggcgattgtcggtatagtctctttttc 37
>35216_aae-mir-286b-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 agtgactagaccgaacactcgt 88
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35217_aae-mir-286b-2:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 agtgactagaccgaacactcgt 88
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35215_aae-mir-286a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 agtgactagaccgaacactcg 87
|||||||||||||||||||||
Sbjct: 61 agtgactagaccgaacactcg 81
>35308_aga-mir-286:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 agtgactagaccgaacactcg 87
|||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcg 79
