miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36216_der-mir-309:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 68/69 (98%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctag-cagcactgggtaaagtttg 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 attatacgacaaaccttgttcggttttgccaatttcctagccagcactgggtaaagtttg 60
Query: 60 tcctataat 68
|||||||||
Sbjct: 61 tcctataat 69
>36455_dme-mir-309:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctag-cagcactgggtaaagtttg 59
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 attatacgacaaaccttgttcggttttgccaatttccaagccagcactgggtaaagtttg 60
Query: 60 tcctataat 68
|||||||||
Sbjct: 61 tcctataat 69
>36456_dme-mir-309:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctag-cagcactgggtaaagtttg 59
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 attatacgacaaaccttgttcggttttgccaatttccaagccagcactgggtaaagtttg 60
Query: 60 tcctataat 68
|||||||||
Sbjct: 61 tcctataat 69
>37176_dse-mir-309:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctag-cagcactgggtaaagtttg 59
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 attatacgacaaaccttgttcggttttgccaatttccaagccagcactgggtaaagtttg 60
Query: 60 tcctataat 68
|||||||||
Sbjct: 61 tcctataat 69
>37252_dsi-mir-309:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctag-cagcactgggtaaagtttg 59
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 attatacgacaaaccttgttcggttttgccaatttccaagccagcactgggtaaagtttg 60
Query: 60 tcctataat 68
|||||||||
Sbjct: 61 tcctataat 69
>37545_dya-mir-309:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctag-cagcactgggtaaagtttg 59
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 1 attatacgacaaaccttgttctgttttgccaatttcctagccagcactgggtaaagtttg 60
Query: 60 tcctataat 68
|||||||||
Sbjct: 61 tcctataat 69
>36888_dpe-mir-309:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctagcagcactgggtaaagtttgt 60
||||||||| |||| |||||| |||||||||| || || |||||||||||| ||||||||
Sbjct: 1 attatacgataaactttgttcagttttgccaacttgcttgcagcactgggtgaagtttgt 60
Query: 61 cctataat 68
| ||||||
Sbjct: 61 cttataat 68
>36971_dps-mir-309:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 attatacgacaaaccttgttcggttttgccaatttcctagcagcactgggtaaagtttgt 60
||||||||| |||| |||||| |||||||||| || || |||||||||||| ||||||||
Sbjct: 1 attatacgataaactttgttcagttttgccaacttgcttgcagcactgggtgaagtttgt 60
Query: 61 cctataat 68
| ||||||
Sbjct: 61 cttataat 68
