miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37470_dwi-mir-314:mirbase
Length = 90
Score = 139 bits (70), Expect = 4e-34
Identities = 87/90 (96%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaa-tcagt-ttggattttgt 58
|||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaattcaatgttggattttgt 60
Query: 59 tacctctggtattcgagccaataagttcgg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36889_dpe-mir-314:mirbase
Length = 89
Score = 129 bits (65), Expect = 4e-31
Identities = 84/89 (94%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatcag-tttggattttgtt 59
||||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
Query: 60 acctctggtattcgagccaataagttcgg 88
|||||||||||||||||||||||||||||
Sbjct: 61 acctctggtattcgagccaataagttcgg 89
>36973_dps-mir-314:mirbase
Length = 89
Score = 129 bits (65), Expect = 4e-31
Identities = 84/89 (94%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatcag-tttggattttgtt 59
||||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
Query: 60 acctctggtattcgagccaataagttcgg 88
|||||||||||||||||||||||||||||
Sbjct: 61 acctctggtattcgagccaataagttcgg 89
>36225_der-mir-314:mirbase
Length = 90
Score = 125 bits (63), Expect = 6e-30
Identities = 84/90 (93%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatc--agtttggattttgt 58
||||||||||||||||||||||||||||||||||||||| |||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
Query: 59 tacctctggtattcgagccaataagttcgg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37550_dya-mir-314:mirbase
Length = 90
Score = 125 bits (63), Expect = 6e-30
Identities = 84/90 (93%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaa--tcagtttggattttgt 58
|||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaaccccatgtcggattttgt 60
Query: 59 tacctctggtattcgagccaataagttcgg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37181_dse-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 85/90 (94%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaat-cagt-ttggattttgt 58
||||||||||||||||||||||||||||||||||||||||| | | || | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 59 tacctctggtattcgagccaataagttcgg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37257_dsi-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 85/90 (94%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaat-cagt-ttggattttgt 58
||||||||||||||||||||||||||||||||||||||||| | | || | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 59 tacctctggtattcgagccaataagttcgg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36465_dme-mir-314:mirbase
Length = 90
Score = 109 bits (55), Expect = 3e-25
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatc--agtttggattttgt 58
|||||||||||||||||||||| ||||||||||||||||| || | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 59 tacctctggtattcgagccaataagttcgg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36466_dme-mir-314:mirbase
Length = 90
Score = 109 bits (55), Expect = 3e-25
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatc--agtttggattttgt 58
|||||||||||||||||||||| ||||||||||||||||| || | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 59 tacctctggtattcgagccaataagttcgg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37392_dvi-mir-314:mirbase
Length = 91
Score = 91.7 bits (46), Expect = 8e-20
Identities = 83/92 (90%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa--aaatca--gtttggatttt 56
|||||||||||||||||| |||||||||| ||||||||| || ||| |||||||||||
Sbjct: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgtttggatttt 59
Query: 57 gttacctctggtattcgagccaataagttcgg 88
||| ||| ||||||||||||||||||||||||
Sbjct: 60 gttgcctttggtattcgagccaataagttcgg 91
>36308_dgr-mir-314:mirbase
Length = 76
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 ggtattcgagccaataagttcgg 88
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
>36814_dmo-mir-314:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
