miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36894_dpe-mir-318:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 18 gttcagttgtgtcacttttgcgagcatcactgggctttgtttatctcataag 69
|||||||| |||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 18 gttcagttttgtcacattt-cgagcatcactgggctttgtttatctcataag 68
>36977_dps-mir-318:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 18 gttcagttgtgtcacttttgcgagcatcactgggctttgtttatctcataag 69
|||||||| |||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 18 gttcagttttgtcacattt-cgagcatcactgggctttgtttatctcataag 68
>36229_der-mir-318:mirbase
Length = 68
Score = 67.9 bits (34), Expect = 8e-13
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 5 tgggatacacacggttcagttgtgtcacttttgcgagcatcactgggctttgtttatctc 64
|||||||||||| |||||||| |||||| || | |||||||||||||||||||||||||
Sbjct: 5 tgggatacacacagttcagttttgtcacactt-caagcatcactgggctttgtttatctc 63
Query: 65 at 66
||
Sbjct: 64 at 65
>36473_dme-mir-318:mirbase
Length = 68
Score = 67.9 bits (34), Expect = 8e-13
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 5 tgggatacacacggttcagttgtgtcacttttgcgagcatcactgggctttgtttatctc 64
|||||||||||| |||||||| |||||| || | |||||||||||||||||||||||||
Sbjct: 5 tgggatacacacagttcagttttgtcacactt-caagcatcactgggctttgtttatctc 63
Query: 65 at 66
||
Sbjct: 64 at 65
>36474_dme-mir-318:mirbase
Length = 68
Score = 67.9 bits (34), Expect = 8e-13
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 5 tgggatacacacggttcagttgtgtcacttttgcgagcatcactgggctttgtttatctc 64
|||||||||||| |||||||| |||||| || | |||||||||||||||||||||||||
Sbjct: 5 tgggatacacacagttcagttttgtcacactt-caagcatcactgggctttgtttatctc 63
Query: 65 at 66
||
Sbjct: 64 at 65
>37185_dse-mir-318:mirbase
Length = 68
Score = 67.9 bits (34), Expect = 8e-13
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 5 tgggatacacacggttcagttgtgtcacttttgcgagcatcactgggctttgtttatctc 64
|||||||||||| |||||||| |||||| || | |||||||||||||||||||||||||
Sbjct: 5 tgggatacacacagttcagttttgtcacactt-caagcatcactgggctttgtttatctc 63
Query: 65 at 66
||
Sbjct: 64 at 65
>37475_dwi-mir-318-2:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 5e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 38 cgagcatcactgggctttgtttatctcataa 68
|||||||||||||||||||||||||||||||
Sbjct: 39 cgagcatcactgggctttgtttatctcataa 69
>36312_dgr-mir-318:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 40 agcatcactgggctttgtttatctcataag 69
||||||||||||||||||||||||||||||
Sbjct: 40 agcatcactgggctttgtttatctcataag 69
>36818_dmo-mir-318:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 40 agcatcactgggctttgtttatctcataag 69
||||||||||||||||||||||||||||||
Sbjct: 40 agcatcactgggctttgtttatctcataag 69
>37261_dsi-mir-318:mirbase
Length = 68
Score = 60.0 bits (30), Expect = 2e-10
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 5 tgggatacacacggttcagttgtgtcacttttgcgagcatcactgggctttgtttatctc 64
|||||||||||| |||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 5 tgggatacacacagttcagttttgtcacacttta-agcatcactgggctttgtttatctc 63
Query: 65 at 66
||
Sbjct: 64 at 65
>37397_dvi-mir-318:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 40 agcatcactgggctttgtttatctcataag 69
||||||||||||||||||||||||||||||
Sbjct: 40 agcatcactgggctttgtttatctcataag 69
>37474_dwi-mir-318-1:mirbase
Length = 71
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 cgagcatcactgggctttgtttatctcata 67
||||||||||||||||||||||||||||||
Sbjct: 39 cgagcatcactgggctttgtttatctcata 68
>37556_dya-mir-318:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 agcatcactgggctttgtttatctcat 66
|||||||||||||||||||||||||||
Sbjct: 39 agcatcactgggctttgtttatctcat 65
