miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAPQ01006581.1/272485-272396 7220:Drosophila
erecta
Length = 90
Score = 176 bits (89), Expect = 3e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 tagctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggtt 60
Query: 61 ctgcgggtgccaaaatttaatcaacagct 89
|||||||||||||||||||||||||||||
Sbjct: 61 ctgcgggtgccaaaatttaatcaacagct 89
>RF00706;mir-263;AAPP01019315.1/707685-707774 7217:Drosophila
ananassae
Length = 90
Score = 133 bits (67), Expect = 4e-31
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 3 gctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggttct 62
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttct 62
Query: 63 gcgggtgccaaaatt 77
|||||||||||||||
Sbjct: 63 gcgggtgccaaaatt 77
>RF00706;mir-263;AAKO01000155.1/113509-113420 7238:Drosophila
sechellia
Length = 90
Score = 131 bits (66), Expect = 2e-30
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 3 gctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggttct 62
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 3 gctgactttgagtcttggcactgggagaattcacagttgacttgattattctgtggttct 62
Query: 63 gcgggtgccaaaatttaa 80
||||||||||||| ||||
Sbjct: 63 gcgggtgccaaaacttaa 80
>RF00706;mir-263;AAQB01006546.1/140884-140979 7260:Drosophila
willistoni
Length = 96
Score = 85.7 bits (43), Expect = 9e-17
Identities = 66/72 (91%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttgatt-ttat----tattctgtggttctgcgggtg 69
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 74
Query: 70 ccaaaatttaat 81
||||||| ||||
Sbjct: 75 ccaaaatctaat 86
>RF00706;mir-263;AANI01017489.1/74722-74633 7244:Drosophila
virilis
Length = 90
Score = 83.8 bits (42), Expect = 3e-16
Identities = 63/69 (91%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttgattttat--tattctgtggttctgcgggtgcca 72
||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagtcgattacataatattctgtggttctgcgggtgcca 73
Query: 73 aaatttaat 81
|||| ||||
Sbjct: 74 aaatgtaat 82
>RF00706;mir-263;AAFS01001003.1/35414-35505 46245:Drosophila
pseudoobscura pseudoobscura
Length = 92
Score = 79.8 bits (40), Expect = 5e-15
Identities = 60/64 (93%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttgatttt-at-tattctgtggttctgcgggtgcca 72
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
Query: 73 aaat 76
||||
Sbjct: 75 aaat 78
>RF00706;mir-263;ABKP02026803.1/39465-39371 377271:Anopheles
gambiae M
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>RF00706;mir-263;AADK01025663.1/3361-3450 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacag 38
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAGE02001908.1/33266-33358 7159:Aedes aegypti
(yellow fever mosquito)
Length = 93
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacag 38
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
