miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00787;mir-288;AANI01016239.1/44496-44592 7244:Drosophila
virilis
Length = 97
Score = 157 bits (79), Expect = 3e-38
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 2 gccgtgtcgtaattagctgtgcagaacgtagctggcgataattaatgacgttggtcacgt 61
|||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 3 gccgcgtcgtaattagctgtgcacaacgttgctggcgataattaatgactttggtcacgt 62
Query: 62 tggtttcatgtcgatttcatttcatgacacggccg 96
|||||||||||||||||||||||||||||||||||
Sbjct: 63 tggtttcatgtcgatttcatttcatgacacggccg 97
>RF00787;mir-288;AAQB01006401.1/336794-336697 7260:Drosophila
willistoni
Length = 98
Score = 123 bits (62), Expect = 4e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 96
Query: 95 cg 96
||
Sbjct: 97 cg 98
>RF00787;mir-288;AC093440.2/172834-172738 7227:Drosophila
melanogaster (fruit fly)
Length = 97
Score = 115 bits (58), Expect = 1e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 ggcgataattaatgacggtggtcacgttggtttcatgtcgatttcatttcatgacacggc 95
Query: 95 cg 96
||
Sbjct: 96 cg 97
