miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00717;mir-315;AAPT01020729.1/201657-201576 7222:Drosophila
grimshawi
Length = 82
Score = 163 bits (82), Expect = 4e-40
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 cgctcatataattttgattgttgctcagaaagcctttcacttgacacttggctttcgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgctcatataattttgattgttgctcagaaagcctttcacttgacacttggctttcgagt 60
Query: 61 aataatcgaaaccaaataagcg 82
||||||||||||||||||||||
Sbjct: 61 aataatcgaaaccaaataagcg 82
>RF00717;mir-315;AANI01017430.1/85121-85040 7244:Drosophila
virilis
Length = 82
Score = 97.6 bits (49), Expect = 2e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcctttcacttgacacttggctttcgagtaataa 65
|||| |||||||||||||||||||||||| | || | | ||||||||||||||||||||
Sbjct: 6 atatcattttgattgttgctcagaaagccctgcattcaatacttggctttcgagtaataa 65
Query: 66 tcgaaaccaaataagcg 82
|||||||||||||||||
Sbjct: 66 tcgaaaccaaataagcg 82
>RF00717;mir-315;AAPU01011669.1/1431-1347 7230:Drosophila
mojavensis
Length = 85
Score = 81.8 bits (41), Expect = 1e-15
Identities = 71/80 (88%), Gaps = 7/80 (8%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc-----tttcacttgacacttggctttcgagt 60
||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcccgtaatttaacttaaca--tggctttcgagt 63
Query: 61 aataatcgaaaccaaataag 80
||||||||||||||||||||
Sbjct: 64 aataatcgaaaccaaataag 83
>RF00717;mir-315;ABLF01028780.1/3045-2960 7029:Acyrthosiphon pisum
(pea aphid)
Length = 86
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 attttgattgttgctcagaaagcctttca 39
|||||||||||||||||||||||||||||
Sbjct: 11 attttgattgttgctcagaaagcctttca 39
>RF00717;mir-315;AASU01006755.1/588-667 7240:Drosophila simulans
Length = 80
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcc 34
>RF00717;mir-315;AAPQ01006582.1/536778-536860 7220:Drosophila
erecta
Length = 83
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcc 34
>RF00717;mir-315;AADG05000960.1/7218-7138 7460:Apis mellifera
(honey bee)
Length = 81
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcctt 36
|||||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcctt 36
>RF00717;mir-315;AAGE02021501.1/12488-12571 7159:Aedes aegypti
(yellow fever mosquito)
Length = 84
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 aattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||
Sbjct: 10 aattttgattgttgctcagaaagcc 34
>RF00717;mir-315;AAAB01006400.1/15231-15314 180454:Anopheles
gambiae str. PEST
Length = 84
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 aattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||
Sbjct: 10 aattttgattgttgctcagaaagcc 34
>RF00717;mir-315;AAZX01000470.1/15987-15906 7425:Nasonia
vitripennis (jewel wasp)
Length = 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcct 35
||||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcct 35
>RF00717;mir-315;AAFS01000172.1/91075-90992 46245:Drosophila
pseudoobscura pseudoobscura
Length = 84
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>RF00717;mir-315;AAJJ01004236.1/2476-2553 7070:Tribolium castaneum
(red flour beetle)
Length = 78
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 11 ttttgattgttgctcagaaagcc 33
