miRNEST 2.0, an integrative microRNA resource :: BLAST
>54931_zma-miR159b:pmrd
Length = 221
Score = 174 bits (88), Expect = 2e-44
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 gtcttaaggcggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagctg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtcttaaggcggtgctcccttcaaaccaataaacggtcgatctgatgggtggtacagctg 71
Query: 61 ctcgttcatggttcccactgtcccatctcatc 92
||||||||||||||||||||||||||||||||
Sbjct: 72 ctcgttcatggttcccactgtcccatctcatc 103
Score = 151 bits (76), Expect = 3e-37
Identities = 89/92 (96%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 125 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 184
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 119 tgcttgagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgacc 177
Query: 185 gctgtttggagtgaagggagctctgcatcttg 216
|||||||||| |||||||||||||||||||||
Sbjct: 178 gctgtttggattgaagggagctctgcatcttg 209
>54934_zma-miR159e:pmrd
Length = 203
Score = 170 bits (86), Expect = 3e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 125 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 177
Query: 185 gctgtttggagtgaagggagctctgc 210
||||||||||||||||||||||||||
Sbjct: 178 gctgtttggagtgaagggagctctgc 203
Score = 159 bits (80), Expect = 1e-39
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 13 tgctcccttcacaccaataaacggtcgatctgatgggtggtacagctgctcgttcatggt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tgctcccttcacaccaataaacggtcgatctgatgggtggtacagctgctcgttcatggt 65
Query: 73 tcccactgtcccatctcatc 92
||||||||||||||||||||
Sbjct: 66 tcccactgtcccatctcatc 85
>54629_sof-miR159b:pmrd
Length = 266
Score = 99.6 bits (50), Expect = 9e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 128 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 187
||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 167 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 225
Query: 188 gtttggagtgaagggagctctgcatc 213
|||||| ||||||||||||||||||
Sbjct: 226 ctttggattgaagggagctctgcatc 251
Score = 63.9 bits (32), Expect = 5e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 41 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatc 92
||||| ||||||| | ||||||||||||||||||||||| ||| ||||||||
Sbjct: 52 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatc 103
>54628_sof-miR159a:pmrd
Length = 265
Score = 99.6 bits (50), Expect = 9e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 128 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 187
||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 166 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 224
Query: 188 gtttggagtgaagggagctctgcatc 213
|||||| ||||||||||||||||||
Sbjct: 225 ctttggattgaagggagctctgcatc 250
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 gctgctcgttcatggttcccactgtcccatctcatc 92
||||||||||||||||||||||| ||| ||||||||
Sbjct: 68 gctgctcgttcatggttcccactatcctatctcatc 103
>54930_zma-miR159a:pmrd
Length = 246
Score = 91.7 bits (46), Expect = 2e-19
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 128 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 187
||||||| |||||||||||||||||||||||||||||| || |||||| | || |||||
Sbjct: 147 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgccccctt-gctggccgct 205
Query: 188 gtttggagtgaagggagctctgcatc 213
|||||| ||||||||||||||||||
Sbjct: 206 ctttggattgaagggagctctgcatc 231
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 gctgctcgttcatggttcccactgtcccatctcatc 92
||||||||||||||||||||||| ||| ||||||||
Sbjct: 69 gctgctcgttcatggttcccactatcctatctcatc 104
>51338_pgl-miR159:pmrd
Length = 226
Score = 87.7 bits (44), Expect = 3e-18
Identities = 75/84 (89%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 126 gcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccg 185
||||||||| ||||||||| |||||||||||||||||||| ||||||||| | || |||
Sbjct: 144 gcttgagataggcttgtggcttgcatgaccgaggagctgcaccgtcccctt-gctggccg 202
Query: 186 ctgtttggagtgaagggagctctg 209
|| |||||| ||||||||||||||
Sbjct: 203 ctctttggattgaagggagctctg 226
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 50 tggtacagctgctcgttcatggttcccactgtcccatctcat 91
|||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 42 tggtacagctgctcgttcatggttcccactatcctatctcat 83
>54673_tae-miR159a:pmrd
Length = 177
Score = 81.8 bits (41), Expect = 2e-16
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 140 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 199
||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||
Sbjct: 106 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 164
Query: 200 gggagctctgcat 212
|||||||||||||
Sbjct: 165 gggagctctgcat 177
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 cagctgctcgttcatggttcccactgtcccatctc 89
||||||||||||||||||||||||| ||| |||||
Sbjct: 48 cagctgctcgttcatggttcccactatcctatctc 82
>54631_sof-miR159d:pmrd
Length = 265
Score = 81.8 bits (41), Expect = 2e-16
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 137 gcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagt 196
||||||||||||||||||||| ||||||| ||||||||| | || ||||| |||||| |
Sbjct: 175 gcttgtggtttgcatgaccgatgagctgcaccgtcccctt-gctggccgctctttggatt 233
Query: 197 gaagggagctctgcatc 213
|||||||||||||||||
Sbjct: 234 gaagggagctctgcatc 250
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 gctgctcgttcatggttcccactgtcccatctcatc 92
||||||||||||||||||||||| ||| ||||||||
Sbjct: 68 gctgctcgttcatggttcccactatcctatctcatc 103
>48657_hvv-miR159b:pmrd
Length = 174
Score = 79.8 bits (40), Expect = 8e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 130 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 189
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 154
Query: 190 ttggagtgaagggagctctg 209
||||| ||||||||||||||
Sbjct: 155 ttggattgaagggagctctg 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 55 cagctgctcgttcatggttcccactgtcccatctc 89
|||||||| |||||||||||||||| ||| |||||
Sbjct: 47 cagctgcttgttcatggttcccactatcctatctc 81
>54632_sof-miR159e:pmrd
Length = 264
Score = 73.8 bits (37), Expect = 5e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 128 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 187
||||||| |||||||||||||||||||||| ||||||| ||||||||| | || |||||
Sbjct: 165 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt-gctggccgct 223
Query: 188 gtttggagtgaagggagctct 208
|||||| |||| ||||||||
Sbjct: 224 ctttggattgaaaggagctct 244
Score = 63.9 bits (32), Expect = 5e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 41 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatc 92
||||| ||||||| | ||||||||||||||||||||||| ||| ||||||||
Sbjct: 51 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatc 102
>54392_sar-miR159:pmrd
Length = 175
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 130 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 189
||||| ||| ||||| ||||||||||||||||| || |||||||| ||| || ||||| |
Sbjct: 97 gagataggcctgtggcttgcatgaccgaggagccgcatcgtcccc-tcgctggccgctct 155
Query: 190 ttggagtgaagggagctctg 209
||||| ||||||||||||||
Sbjct: 156 ttggattgaagggagctctg 175
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 47 gggtggtacagctgctcgttcatggttcccact 79
|||||||||||||||||||||||||||||||||
Sbjct: 40 gggtggtacagctgctcgttcatggttcccact 72
>48820_osa-miR159b:pmrd
Length = 188
Score = 61.9 bits (31), Expect = 2e-10
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 130 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 189
||||| |||||||||||||||||||| |||||| | || | |||| | ||||| || |
Sbjct: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactcctt-gctgaccactct 158
Query: 190 ttggagtgaagggagctctgcatcttg 216
||||| |||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctgcatcttg 185
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 40 atctgatgggtggtacagctgctcgttcatggttcccact 79
|||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
>48656_hvv-miR159a:pmrd
Length = 303
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 189 tttggagtgaagggagctctgcatcttg 216
|||||| |||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatcttg 28
>48819_osa-miR159a:pmrd
Length = 272
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 189 tttggagtgaagggagctctgcatctt 215
|||||| ||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 189 tttggagtgaagggagctctgcatctt 215
|||||| ||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 189 tttggagtgaagggagctctgcatct 214
|||||| |||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>54937_zma-miR159m:pmrd
Length = 457
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 189 tttggagtgaagggagctctgcatc 213
|||||| ||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 189 tttggagtgaagggagctctgcatc 213
|||||| ||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 189 tttggagtgaagggagctctgcatcttgc 217
|||||| ||||||||||||| ||||||||
Sbjct: 1 tttggattgaagggagctctacatcttgc 29
>48728_mtr-miR319b:pmrd
Length = 42
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 190 ttggagtgaagggagctctgcatcttgc 217
||||| ||||||||||||| ||||||||
Sbjct: 1 ttggattgaagggagctctacatcttgc 28
