miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36356_dme-mir-11:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgagtgc 75
|||||||||||||||
Sbjct: 61 gttcttgctgagtgc 75
>37130_dse-mir-11:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgagtgc 75
|||||||||||||||
Sbjct: 61 gttcttgctgagtgc 75
>37206_dsi-mir-11:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgagtgc 75
|||||||||||||||
Sbjct: 61 gttcttgctgagtgc 75
>37499_dya-mir-11:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgag 72
||||||||||||
Sbjct: 61 gttcttgctgag 72
>36170_der-mir-11:mirbase
Length = 75
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 1 gcacttgccaagaactttctctgtgacctgcgtgtactgaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgag 72
||||||||||||
Sbjct: 61 gttcttgctgag 72
>37421_dwi-mir-11:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 ccgcatcacagtctgagttcttgctgag 72
||||||||||||||||||||||||||||
Sbjct: 53 ccgcatcacagtctgagttcttgctgag 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 4 cttgtcaagaactttctctgtgacccgcgtg 34
|||||||||| || ||||||||||| |||||
Sbjct: 2 cttgtcaagatctctctctgtgacctgcgtg 32
>36258_dgr-mir-11:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 46 cgcatcacagtctgagttcttgctgag 72
|||||||||||||||||||||||||||
Sbjct: 51 cgcatcacagtctgagttcttgctgag 77
>36841_dpe-mir-11:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 agccgcatcacagtctgagttcttgctgag 72
|||| |||||||||||||||||||||||||
Sbjct: 40 agccacatcacagtctgagttcttgctgag 69
>36917_dps-mir-11:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 agccgcatcacagtctgagttcttgctgag 72
|||| |||||||||||||||||||||||||
Sbjct: 40 agccacatcacagtctgagttcttgctgag 69
>36092_dan-mir-11:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgctgag 72
|||||||||||||||||||||||||
Sbjct: 52 catcacagtctgagttcttgctgag 76
>36768_dmo-mir-11:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 45 ccgcatcacagtctgagttcttgct 69
|||||||||||||||||||||||||
Sbjct: 51 ccgcatcacagtctgagttcttgct 75
>37344_dvi-mir-11:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 45 ccgcatcacagtctgagttcttgct 69
|||||||||||||||||||||||||
Sbjct: 51 ccgcatcacagtctgagttcttgct 75
>35178_aae-mir-11:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgct 69
||||||||||||||||||||||
Sbjct: 67 catcacagtctgagttcttgct 88
>35279_aga-mir-11:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgct 69
||||||||||||||||||||||
Sbjct: 63 catcacagtctgagttcttgct 84
>36009_cqu-mir-11:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgct 69
||||||||||||||||||||||
Sbjct: 52 catcacagtctgagttcttgct 73
