miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36397_dme-mir-193:mirbase
Length = 108
Score = 214 bits (108), Expect = 1e-56
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 tgtgtgcccttattatggttgggattttttagatcagcagttattgctatatagccatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgtgcccttattatggttgggattttttagatcagcagttattgctatatagccatat 60
Query: 61 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 108
>37226_dsi-mir-193:mirbase
Length = 120
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 tgtgtgcccttattatggttgggattttttagatcagcagttattgctatatagccatat 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgtgtgcccccattatggttgggattttttagatcagcagttattgctatatagccatat 63
Query: 61 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 111
>36939_dps-mir-193:mirbase
Length = 102
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 12 attatggttgggattttttagatcagcagttattgctatatagccatatttataaatctt 71
||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 8 attatagttgggattttttagatcagcagttattgctatacagccgtattaataaatctt 67
Query: 72 ctactggcctactaagtcccaacataatgagagta 106
|||||||||||||||||||||||||||||||||||
Sbjct: 68 ctactggcctactaagtcccaacataatgagagta 102
>35198_aae-mir-193:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 ctactggcctactaagtcccaac 94
|||||||||||||||||||||||
Sbjct: 71 ctactggcctactaagtcccaac 93
