miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36400_dme-mir-210:mirbase
Length = 100
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 aaaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgt 60
Query: 61 gtgacagcggctattgtaagaggccatagaagcaacagcc 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgacagcggctattgtaagaggccatagaagcaacagcc 100
>36189_der-mir-210:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 2 aaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 60
Query: 62 tgacagcggctattgtaagaggccat 87
||||||||||||||||||||||||||
Sbjct: 61 tgacagcggctattgtaagaggccat 86
>37149_dse-mir-210:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 2 aaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 60
Query: 62 tgacagcggctattgtaagaggccat 87
||||||||||||||||||||||||||
Sbjct: 61 tgacagcggctattgtaagaggccat 86
>37227_dsi-mir-210:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 2 aaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 60
Query: 62 tgacagcggctattgtaagaggccat 87
||||||||||||||||||||||||||
Sbjct: 61 tgacagcggctattgtaagaggccat 86
>36111_dan-mir-210:mirbase
Length = 86
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 4 ggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtg 62
Query: 64 acagcggctattgtaagaggccat 87
||||||||||||||||||||||||
Sbjct: 63 acagcggctattgtaagaggccat 86
>37517_dya-mir-210:mirbase
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 aaggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggtacttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtg 60
Query: 62 tgacagcggctattgtaagaggccat 87
||||||||||||||||||||||||||
Sbjct: 61 tgacagcggctattgtaagaggccat 86
>37442_dwi-mir-210:mirbase
Length = 86
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 8 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 66
Query: 68 cggctattgtaagaggcca 86
|||||||||||||||||||
Sbjct: 67 cggctattgtaagaggcca 85
>36940_dps-mir-210a:mirbase
Length = 94
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 8 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 67
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
Query: 68 cggctattgtaagaggccata 88
|||||||||||||||||||||
Sbjct: 65 cggctattgtaagaggccata 85
>36941_dps-mir-210b:mirbase
Length = 109
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 8 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 67
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 90 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 31
Query: 68 cggctattgtaagaggccata 88
|||||||||||||||||||||
Sbjct: 30 cggctattgtaagaggccata 10
>36863_dpe-mir-210:mirbase
Length = 84
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 8 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 67
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
Query: 68 cggctattgtaagaggccat 87
||||||||||||||||||||
Sbjct: 65 cggctattgtaagaggccat 84
>36787_dmo-mir-210:mirbase
Length = 86
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 4 ggtgcttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtg 63
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3 ggtgcttattgcagctgctggccactgcacaagattagactcaagactcttgtgcgtgtg 62
Query: 64 acagcggctattgtaagaggcca 86
|||||||||||||||||| ||||
Sbjct: 63 acagcggctattgtaagatgcca 85
>37363_dvi-mir-210:mirbase
Length = 84
Score = 141 bits (71), Expect = 1e-34
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 8 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 67
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 cttattgcagctgctggccactgcacaagattagactcaagactcttgtgcgtgtgacag 64
Query: 68 cggctattgtaagag 82
|||||||||||||||
Sbjct: 65 cggctattgtaagag 79
>35374_ame-mir-210:mirbase
Length = 85
Score = 115 bits (58), Expect = 6e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 13 tgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacagcggct 72
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11 tgcagctgctggccactgcacaagattagacataagactcttgtgcgtgtgacagcggct 70
Query: 73 at 74
||
Sbjct: 71 at 72
>37582_ngi-mir-210:mirbase
Length = 85
Score = 115 bits (58), Expect = 6e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 13 tgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacagcggct 72
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11 tgcagctgctggccactgcacaagattagacataagactcttgtgcgtgtgacagcggct 70
Query: 73 at 74
||
Sbjct: 71 at 72
>37655_nvi-mir-210:mirbase
Length = 85
Score = 115 bits (58), Expect = 6e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 13 tgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacagcggct 72
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11 tgcagctgctggccactgcacaagattagacataagactcttgtgcgtgtgacagcggct 70
Query: 73 at 74
||
Sbjct: 71 at 72
>36278_dgr-mir-210:mirbase
Length = 86
Score = 109 bits (55), Expect = 4e-25
Identities = 73/78 (93%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 7 gcttattgcagctgctggccactgcacaagattagacttaa--gactcttgtgcgtgtga 64
|||||||| ||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 4 gcttattggagctgctggccactgcacaagattagattcaaaagactcttgtgcgtgtga 63
Query: 65 cagcggctattgtaagag 82
||||||||||||||||||
Sbjct: 64 cagcggctattgtaagag 81
>35199_aae-mir-210:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 9e-20
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 11 attgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacagcgg 70
||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||
Sbjct: 4 attgcagctgctgaccactgcacaagattaga-ttatgactcttgtgcgtgtgacaacgg 62
Query: 71 ctattg 76
||||||
Sbjct: 63 ctattg 68
>36028_cqu-mir-210:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 9e-20
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 11 attgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacagcgg 70
||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||
Sbjct: 4 attgcagctgctgaccactgcacaagattaga-ttatgactcttgtgcgtgtgacaacgg 62
Query: 71 ctattg 76
||||||
Sbjct: 63 ctattg 68
>35543_bmo-mir-210:mirbase
Length = 92
Score = 79.8 bits (40), Expect = 3e-16
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 14 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 70
|||||||||||||||||||||||||||| | || | ||||||||||||||||||||||
Sbjct: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
Query: 71 ctattg 76
||||||
Sbjct: 74 ctattg 79
>35295_aga-mir-210:mirbase
Length = 80
Score = 73.8 bits (37), Expect = 2e-14
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 11 attgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacagcgg 70
||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 8 attgcagctgctgaccactgcacaagattaga-atgcgactcttgtgcgtgtgacaacgg 66
Query: 71 ctatt 75
|||||
Sbjct: 67 ctatt 71
>37753_tca-mir-210:mirbase
Length = 76
Score = 67.9 bits (34), Expect = 1e-12
Identities = 60/68 (88%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 13 tgcagctgctggccactgcacaagattagac---ttaagactcttgtgcgtgtgacagcg 69
|||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 6 tgcagctgctggacgctgcacaagattagatattttagaactcttgtgcgtgtgacagcg 65
Query: 70 gctattgt 77
||||||||
Sbjct: 66 gctattgt 73
>37754_tca-mir-210:mirbase
Length = 76
Score = 67.9 bits (34), Expect = 1e-12
Identities = 60/68 (88%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 13 tgcagctgctggccactgcacaagattagac---ttaagactcttgtgcgtgtgacagcg 69
|||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 6 tgcagctgctggacgctgcacaagattagatattttagaactcttgtgcgtgtgacagcg 65
Query: 70 gctattgt 77
||||||||
Sbjct: 66 gctattgt 73
>37564_lmi-mir-210:mirbase
Length = 62
Score = 63.9 bits (32), Expect = 2e-11
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 16 agctgctggccactgcacaagattagactt---aagactcttgtgcgtgtgacagcggct 72
||||||||| |||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1 agctgctggacactgcacaagattagcgattaaaagactcttgtgcgtgtgacagcggct 60
Query: 73 at 74
||
Sbjct: 61 at 62
>25831_xtr-mir-210:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgtgcgtgtgacagcggcta 73
||||||||||||||||||||
Sbjct: 57 tgtgcgtgtgacagcggcta 76
>27426_mdo-mir-210:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgtgcgtgtgacagcggcta 73
||||||||||||||||||||
Sbjct: 50 tgtgcgtgtgacagcggcta 69
>34366_dre-mir-210:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgtgcgtgtgacagcggcta 73
||||||||||||||||||||
Sbjct: 49 tgtgcgtgtgacagcggcta 68
>34634_fru-mir-210:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgtgcgtgtgacagcggcta 73
||||||||||||||||||||
Sbjct: 56 tgtgcgtgtgacagcggcta 75
>34782_tni-mir-210:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgtgcgtgtgacagcggcta 73
||||||||||||||||||||
Sbjct: 48 tgtgcgtgtgacagcggcta 67
