miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00822;mir-274;AAKO01000079.1/37948-38047 7238:Drosophila
sechellia
Length = 100
Score = 167 bits (84), Expect = 3e-41
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 1 tcctgtgttgcagtttcgttttgtgaccgacactaacgggtaattgtttggccgccagga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 1 tcctgtgttgcagtttcgttttgtgaccgacactaacgggtaattgtttgatcaccagga 60
Query: 61 ttactcgtttttgcgatcacaaattatgaaattgcagcaa 100
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 ttactcgtttttgcgatcacaaatcatgaaattgcagcaa 100
>RF00822;mir-274;AAPP01019289.1/330187-330287 7217:Drosophila
ananassae
Length = 101
Score = 95.6 bits (48), Expect = 1e-19
Identities = 85/96 (88%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 6 tgttgcagtttcgttttgtgaccgacactaacgggtaattgtttgg-ccgccaggattac 64
||||||||||||||||||||||||||||||||||||| || || | |||||||||
Sbjct: 6 tgttgcagtttcgttttgtgaccgacactaacgggtattttacaggacatacaggattac 65
Query: 65 tcgtttttgcgatcacaaattatgaaattgcagcaa 100
|||||||||||||||||||| ||||||||||||||
Sbjct: 66 tcgtttttgcgatcacaaatcctgaaattgcagcaa 101
>RF00822;mir-274;AADE01002814.1/8876-8780 46245:Drosophila
pseudoobscura pseudoobscura
Length = 97
Score = 87.7 bits (44), Expect = 2e-17
Identities = 83/92 (90%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 9 tgcagtttcgttttgtgaccgacactaacgggtaattgtttggccgccaggattactcgt 68
||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||
Sbjct: 9 tgcagtttcattttgtgaccgacactaacgggtaa-tggctggccg-caggactactcgt 66
Query: 69 ttttgcgatcacaaattatgaaattgcagcaa 100
|||||||||||| ||| ||||||||||||||
Sbjct: 67 ttttgcgatcac-aatactgaaattgcagcaa 97
>RF00822;mir-274;AAPU01011627.1/22605-22713 7230:Drosophila
mojavensis
Length = 109
Score = 75.8 bits (38), Expect = 9e-14
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 tcctgtgttgcagtttcgttttgtgaccgacactaacgggta 42
|||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tcctgtgttgcagtttcggtttgtgaccgacactaacgggta 42
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 62 tactcgtttttgcgatcacaaattatgaaattgca 96
|||||||||||||||||||||||| ||||||||||
Sbjct: 71 tactcgtttttgcgatcacaaattctgaaattgca 105
>RF00822;mir-274;AAQB01007682.1/34817-34703 7260:Drosophila
willistoni
Length = 115
Score = 71.9 bits (36), Expect = 1e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 61 ttactcgtttttgcgatcacaaattatgaaattgcagcaa 100
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 76 ttactcgtttttgcgatcacaaattctgaaattgcagcaa 115
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 6 tgttgcagtttcgttttgtgaccgacactaacgggta 42
|||||||||||| ||||||||||||||||||||||||
Sbjct: 6 tgttgcagtttcattttgtgaccgacactaacgggta 42
>RF00822;mir-274;AAPT01020611.1/127253-127143 7222:Drosophila
grimshawi
Length = 111
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 5 gtgttgcagtttcgttttgtgaccgacactaacgggta 42
|||||||||||||| |||||||||||||||||||||||
Sbjct: 5 gtgttgcagtttcggtttgtgaccgacactaacgggta 42
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 61 ttactcgtttttgcgatcacaaattatgaaattgca 96
||||||||||||||||||||||||| ||||||||||
Sbjct: 72 ttactcgtttttgcgatcacaaattctgaaattgca 107
>RF00822;mir-274;AANI01017486.1/215294-215400 7244:Drosophila
virilis
Length = 107
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 6 tgttgcagtttcgttttgtgaccgacactaacgggta 42
||||||||||||| |||||||||||||||||||||||
Sbjct: 6 tgttgcagtttcggtttgtgaccgacactaacgggta 42
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 61 ttactcgtttttgcgatcacaaattatgaaattgca 96
||||||||||||||||||||||||| ||||||||||
Sbjct: 68 ttactcgtttttgcgatcacaaattctgaaattgca 103
