miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00724;mir-282;AE014296.4/3251022-3251116 7227:Drosophila
melanogaster (fruit fly)
Length = 95
Score = 188 bits (95), Expect = 9e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 agtttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
Query: 61 catagcctataagaggttaggtgtaccaaggcgaa 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 catagcctataagaggttaggtgtaccaaggcgaa 95
>RF00724;mir-282;AAPU01011488.1/130621-130527 7230:Drosophila
mojavensis
Length = 95
Score = 113 bits (57), Expect = 4e-25
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 3 tttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagaca 62
||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 3 tttccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagaca 62
Query: 63 tagcctataagaggttaggtgtaccaagg 91
|||||||| |||||||||||||| |||||
Sbjct: 63 tagcctatgagaggttaggtgtagcaagg 91
>RF00724;mir-282;AAQB01009652.1/11236-11325 7260:Drosophila
willistoni
Length = 90
Score = 93.7 bits (47), Expect = 4e-19
Identities = 77/87 (88%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 5 tccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagacata 64
||||| ||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 5 tccttataaatctagcctctactaggctttgtctgtgcatttgga-----ttcagacata 59
Query: 65 gcctataagaggttaggtgtaccaagg 91
|||||| ||||||||||||||||||||
Sbjct: 60 gcctatgagaggttaggtgtaccaagg 86
>RF00724;mir-282;AAPT01020493.1/70677-70773 7222:Drosophila
grimshawi
Length = 97
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 4 ttccttctaaatctagcctctactaggctttgtctgtgca--ttcgaaagccgatcagac 61
|||||| ||||||||||||||||||||||||||||||||| || || | |||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 63
Query: 62 atagcctataagaggttaggtgtac 86
||||||||| |||||||||||||||
Sbjct: 64 atagcctatgagaggttaggtgtac 88
>RF00724;mir-282;AAGE02015805.1/19430-19533 7159:Aedes aegypti
(yellow fever mosquito)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 aatctagcctctactaggctttgtctgt 40
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctcctaggctttgtctgt 40
>RF00724;mir-282;ABKP02026817.1/6213-6306 377271:Anopheles gambiae
M
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 aatctagcctctactaggctttgtctgt 40
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctcttctaggctttgtctgt 40
