miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36430_dme-mir-283:mirbase
Length = 100
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 ctcacacgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcacacgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatg 60
Query: 61 aaacactcggaatttcagttggtatcgacttttttgaatt 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacactcggaatttcagttggtatcgacttttttgaatt 100
>36204_der-mir-283:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 6 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 60
Query: 66 ctcggaatttcagttggtatcgacttttttgaatt 100
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcggaatttcagttggtatcgacttttttgaatt 95
>37164_dse-mir-283:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 6 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 60
Query: 66 ctcggaatttcagttggtatcgacttttttgaatt 100
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcggaatttcagttggtatcgacttttttgaatt 95
>37240_dsi-mir-283:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 6 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 60
Query: 66 ctcggaatttcagttggtatcgacttttttgaatt 100
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcggaatttcagttggtatcgacttttttgaatt 95
>37533_dya-mir-283:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 6 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 60
Query: 66 ctcggaatttcagttggtatcgacttttttgaatt 100
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcggaatttcagttggtatcgacttttttgaatt 95
>37378_dvi-mir-283:mirbase
Length = 95
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 7 cgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaacac 66
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 2 cgattctcaaaggtaaatatcagctggtaattctgggagcaatgcctaaatatgaaacac 61
Query: 67 tcggaatttcagttggtatcgacttttttgaatt 100
||||||||||||||||||||||||||||||||||
Sbjct: 62 tcggaatttcagttggtatcgacttttttgaatt 95
>36958_dps-mir-283:mirbase
Length = 97
Score = 159 bits (80), Expect = 5e-40
Identities = 93/96 (96%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 5 cacgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaac 64
|||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 3 cacgattctcaaaggtaaatatcagctggtaattctgggagctaag-caagatatgaaac 61
Query: 65 actcggaatttcagttggtatcgacttttttgaatt 100
||||||||||||||||||||||||||||||||||||
Sbjct: 62 actcggaatttcagttggtatcgacttttttgaatt 97
>36878_dpe-mir-283:mirbase
Length = 94
Score = 157 bits (79), Expect = 2e-39
Identities = 92/95 (96%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 6 acgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaaca 65
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 1 acgattctcaaaggtaaatatcagctggtaattctgggagctaag-caagatatgaaaca 59
Query: 66 ctcggaatttcagttggtatcgacttttttgaatt 100
|||||||||||||||||||||||||||||||||||
Sbjct: 60 ctcggaatttcagttggtatcgacttttttgaatt 94
>36293_dgr-mir-283:mirbase
Length = 94
Score = 155 bits (78), Expect = 7e-39
Identities = 91/94 (96%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 7 cgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaacac 66
|||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 2 cgattctcaaaggtaaatatcagctggtaattctgggagcaatgcc-aaatatgaaacac 60
Query: 67 tcggaatttcagttggtatcgacttttttgaatt 100
||||||||||||||||||||||||||||||||||
Sbjct: 61 tcggaatttcagttggtatcgacttttttgaatt 94
>37457_dwi-mir-283:mirbase
Length = 97
Score = 149 bits (75), Expect = 4e-37
Identities = 90/94 (95%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 9 attctcaaaggtaaatatcagctggtaattctgggagctaagcctaaata--tgaaacac 66
|||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 4 attctcaaaggtaaatatcagctggtaattctgggagctatgcctagatatttgaaacac 63
Query: 67 tcggaatttcagttggtatcgacttttttgaatt 100
||||||||||||||||||||||||||||||||||
Sbjct: 64 tcggaatttcagttggtatcgacttttttgaatt 97
>36126_dan-mir-283:mirbase
Length = 95
Score = 145 bits (73), Expect = 7e-36
Identities = 88/93 (94%)
Strand = Plus / Plus
Query: 8 gattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaacact 67
|||||| |||||||||||||||||||||||||||||||||| |||| | |||||||||||
Sbjct: 3 gattcttaaaggtaaatatcagctggtaattctgggagctatgcctgattatgaaacact 62
Query: 68 cggaatttcagttggtatcgacttttttgaatt 100
||||||||||||||||||||||||||| |||||
Sbjct: 63 cggaatttcagttggtatcgactttttcgaatt 95
>36801_dmo-mir-283:mirbase
Length = 94
Score = 131 bits (66), Expect = 1e-31
Identities = 88/94 (93%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 7 cgattctcaaaggtaaatatcagctggtaattctgggagctaagcctaaatatgaaacac 66
|||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 2 cgattctcaaaggtaaatatcagctggtaattctgggagcaatgcc-caatatgaaacac 60
Query: 67 tcggaatttcagttggtatcgacttttttgaatt 100
||||||||||||||||||| |||||||||||||
Sbjct: 61 tcggaatttcagttggtatatacttttttgaatt 94
>35307_aga-mir-283:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 aaaggtaaatatcagctggtaattct 40
||||||||||||||||||||||||||
Sbjct: 9 aaaggtaaatatcagctggtaattct 34
>35213_aae-mir-283:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 aaaggtaaatatcagctggtaattctggg 43
|||||| ||||||||||||||||||||||
Sbjct: 10 aaaggtcaatatcagctggtaattctggg 38
>36039_cqu-mir-283:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 aaaggtaaatatcagctggtaattctggg 43
|||||| ||||||||||||||||||||||
Sbjct: 17 aaaggtcaatatcagctggtaattctggg 45
>35388_ame-mir-283:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 21 aaatatcagctggtaattctggga 44
>35559_bmo-mir-283:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 taaatatcagctggtaattctggg 43
||||||||||||||||||||||||
Sbjct: 14 taaatatcagctggtaattctggg 37
>37590_ngi-mir-283:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 7 aaatatcagctggtaattctggga 30
>37665_nvi-mir-283:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 21 aaatatcagctggtaattctggga 44
>37785_tca-mir-283:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggg 43
|||||||||||||||||||||||
Sbjct: 11 aaatatcagctggtaattctggg 33
>37786_tca-mir-283:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggg 43
|||||||||||||||||||||||
Sbjct: 11 aaatatcagctggtaattctggg 33
>38764_cte-mir-216b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 aatatcagctggtaattctg 41
||||||||||||||||||||
Sbjct: 9 aatatcagctggtaattctg 28
