miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00789;mir-286;AAPQ01007044.1/1205305-1205207 7220:Drosophila
erecta
Length = 99
Score = 167 bits (84), Expect = 3e-41
Identities = 97/100 (97%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaa-ggtttcgatcgagc 59
Query: 61 gaagtgactagaccgaacactcgtgctataattttaaaat 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaagtgactagaccgaacactcgtgctataattttaaaat 99
>RF00789;mir-286;AAPP01018770.1/56774-56877 7217:Drosophila
ananassae
Length = 104
Score = 109 bits (55), Expect = 7e-24
Identities = 92/104 (88%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaa----ggtttcgatt 56
||||||||||||||||| ||||||||||||| |||||||| | ||| |||| | |
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacaaaaaaattggttaccaac 60
Query: 57 aagcgaagtgactagaccgaacactcgtgctataattttaaaat 100
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaat 104
>RF00789;mir-286;AAFS01000371.1/25325-25421 46245:Drosophila
pseudoobscura pseudoobscura
Length = 97
Score = 91.7 bits (46), Expect = 2e-18
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
|||||||| |||||||| ||||||| ||||| |||||| || |||| |||| ||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag---ggttccgatcaagc 57
Query: 61 gaagtgactagaccgaacactcgtgctataatttta 96
||||||||||||||||||||||||||||||||||||
Sbjct: 58 gaagtgactagaccgaacactcgtgctataatttta 93
>RF00789;mir-286;AAQB01006291.1/71587-71475 7260:Drosophila
willistoni
Length = 113
Score = 77.8 bits (39), Expect = 2e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaat 100
|||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagtgactagaccgaacactcgtgctataattttaaaat 113
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc 39
||||||||||||||||| ||||||||| |||||||||||
Sbjct: 1 ttaaaattgaatggcgattgtcggtatagtctctttttc 39
>RF00789;mir-286;AAPT01006453.1/2821-2925 7222:Drosophila grimshawi
Length = 105
Score = 77.8 bits (39), Expect = 2e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaat 100
|||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaat 105
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>RF00789;mir-286;AAPU01010225.1/183664-183561 7230:Drosophila
mojavensis
Length = 104
Score = 77.8 bits (39), Expect = 2e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaat 100
|||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaat 104
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaa 41
|||||||| |||||||| |||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttcaa 41
>RF00789;mir-286;AANI01014795.1/39192-39293 7244:Drosophila virilis
Length = 102
Score = 77.8 bits (39), Expect = 2e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaat 100
|||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtgactagaccgaacactcgtgctataattttaaaat 102
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa 42
|||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaa 42
>RF00789;mir-286;ABKP02021621.1/18938-19014 377271:Anopheles
gambiae M
Length = 77
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgt 84
|||||||||||||||||||||||
Sbjct: 45 aagtgactagaccgaacactcgt 67
>RF00789;mir-286;AAWU01006018.1/401-308 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 agtgactagaccgaacactcgt 84
||||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcgt 80
>RF00789;mir-286;AAWU01011011.1/917-844 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcg 83
||||||||||||||||||||||
Sbjct: 42 aagtgactagaccgaacactcg 63
>RF00789;mir-286;AAGE02008291.1/17656-17755 7159:Aedes aegypti
(yellow fever mosquito)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 agtgactagaccgaacactcgt 84
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
