miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36445_dme-mir-305:mirbase
Length = 73
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37172_dse-mir-305:mirbase
Length = 73
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36302_dgr-mir-305:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtcactcgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36884_dpe-mir-305:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtcctgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36966_dps-mir-305:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtcctgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37385_dvi-mir-305:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgacttgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37541_dya-mir-305:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtggcccgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36212_der-mir-305:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtggtccgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37249_dsi-mir-305:mirbase
Length = 72
Score = 121 bits (61), Expect = 7e-29
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 60 tacactcaatatg 72
>36134_dan-mir-305:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtccaccgtaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36808_dmo-mir-305:mirbase
Length = 73
Score = 105 bits (53), Expect = 4e-24
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
|||||||||||||||||||||||||||||||||| | | |||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtcagtggaaacccggcacatgttgaag 60
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37464_dwi-mir-305:mirbase
Length = 74
Score = 103 bits (52), Expect = 2e-23
Identities = 71/75 (94%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgt--gtctcgtaacccggcacatgttga 58
|||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtccgt-ttgtaacccggcacatgttga 59
Query: 59 agtacactcaatatg 73
|||||||||||||||
Sbjct: 60 agtacactcaatatg 74
>35218_aae-mir-305:mirbase
Length = 88
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
|||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggttgttttcgatacccggcacatgttggag 67
Query: 61 tacact 66
||||||
Sbjct: 68 tacact 73
>36041_cqu-mir-305:mirbase
Length = 88
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
|||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggttgctttcgatacccggcacatgttggag 67
Query: 61 tacact 66
||||||
Sbjct: 68 tacact 73
>35309_aga-mir-305:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtg 33
|||||||||||||||||||||||||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggtg 40
>37788_tca-mir-305:mirbase
Length = 75
Score = 63.9 bits (32), Expect = 1e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggt 32
||||||||||||||||||||||||||||||||
Sbjct: 3 catgtctattgtacttcatcaggtgctctggt 34
>37789_tca-mir-305:mirbase
Length = 75
Score = 63.9 bits (32), Expect = 1e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggt 32
||||||||||||||||||||||||||||||||
Sbjct: 3 catgtctattgtacttcatcaggtgctctggt 34
>35389_ame-mir-305:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggtg 33
||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41
>35561_bmo-mir-305:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggtg 33
||||||||||||||||||||||||||
Sbjct: 17 attgtacttcatcaggtgctctggtg 42
>37591_ngi-mir-305:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggtg 33
||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41
>37622_nlo-mir-305:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggtg 33
||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41
>37666_nvi-mir-305:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggtg 33
||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41
>34984_isc-mir-305:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctgg 31
||||||||||||||||||||||||
Sbjct: 14 attgtacttcatcaggtgctctgg 37
