miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00844;mir-67;AAPU01010253.1/29382-29448 7230:Drosophila
mojavensis
Length = 67
Score = 117 bits (59), Expect = 2e-26
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 12 gactcactcaacctgggtgtgatgttatttcgatatggtatccatcacaacctccttgag 71
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gactcactcaacctgggtgtgatgttatttcgattcggtatccatcacaacctccttgag 60
Query: 72 tgagcga 78
|||||||
Sbjct: 61 tgagcga 67
>RF00844;mir-67;AAJJ01001473.1/10807-10747 7070:Tribolium
castaneum (red flour beetle)
Length = 61
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ccatcacaacctccttgagtgagcga 78
||||||||||||||||||||||||||
Sbjct: 36 ccatcacaacctccttgagtgagcga 61
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 gactcactcaacctgggtgtgatgt 36
|||||||||||||||||||||||||
Sbjct: 1 gactcactcaacctgggtgtgatgt 25
>RF00844;mir-67;ABKP02019157.1/49006-49065 377271:Anopheles
gambiae M
Length = 60
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 catcacaacctccttgagtgagcga 78
|||||||||||||||||||||||||
Sbjct: 36 catcacaacctccttgagtgagcga 60
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 actcactcaacctgggtgtgatg 35
|||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatg 24
>RF00844;mir-67;AADG05000205.1/41347-41272 7460:Apis mellifera
(honey bee)
Length = 76
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 gactcactcaacctgggtgtgatg 35
||||||||||||||||||||||||
Sbjct: 1 gactcactcaacctgggtgtgatg 24
>RF00844;mir-67;AAZX01010522.1/11245-11164 7425:Nasonia
vitripennis (jewel wasp)
Length = 82
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 actcactcaacctgggtgtgatg 35
|||||||||||||||||||||||
Sbjct: 2 actcactcaacctgggtgtgatg 24
>RF00844;mir-67;ABJB010869367.1/2416-2352 6945:Ixodes scapularis
(black-legged tick)
Length = 65
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 ccatcacaacctccttgagtgag 75
|||||||||||||||||||||||
Sbjct: 40 ccatcacaacctccttgagtgag 62
>RF00844;mir-67;ABLF01022849.1/7851-7790 7029:Acyrthosiphon pisum
(pea aphid)
Length = 62
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 cacaacctccttgagtgagcga 78
||||||||||||||||||||||
Sbjct: 41 cacaacctccttgagtgagcga 62
