miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36478_dme-mir-927:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tggttgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggttgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaag 60
Query: 61 cgtttggattctgaaaccctaccgatccatta 92
||||||||||||||||||||||||||||||||
Sbjct: 61 cgtttggattctgaaaccctaccgatccatta 92
>37263_dsi-mir-927:mirbase
Length = 92
Score = 165 bits (83), Expect = 7e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 5 tgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtt 65
Query: 65 tggattctgaaaccctaccgatccatt 91
||||||||||||||||| |||||||||
Sbjct: 66 tggattctgaaaccctatcgatccatt 92
>36979_dps-mir-927:mirbase
Length = 88
Score = 109 bits (55), Expect = 3e-25
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 8 tgtagagttttagaattcctacgctttaccgtggcata-cgaaattcggcaaagcgtttg 66
||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 7 tgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttg 66
Query: 67 gattctgaaacccta 81
|||||||||||||||
Sbjct: 67 gattctgaaacccta 81
>35571_bmo-mir-927:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattctgaa 75
|||||||||||||||||||||||| || | | | || ||||||||||||||||||| ||
Sbjct: 15 tttagaattcctacgctttaccgttgc-caagtagttgggcaaagcgtttggattctaaa 73
Query: 76 ac 77
||
Sbjct: 74 ac 75
>35585_bmo-mir-1926:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 16 tttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattctgaa 75
|||||||||||||||||||||||| || | | | || ||||||||||||||||||| ||
Sbjct: 75 tttagaattcctacgctttaccgttgc-caagtagttgggcaaagcgtttggattctaaa 17
Query: 76 ac 77
||
Sbjct: 16 ac 15
>35230_aae-mir-927:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgtg 40
|||||||||||||||||||||||||
Sbjct: 8 tttagaattcctacgctttaccgtg 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaaac 77
|||||||||||||| |||||||||
Sbjct: 48 ggcaaagcgtttgggttctgaaac 71
>35318_aga-mir-927:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 cggcaaagcgtttggattctgaaac 77
|||||||||||||||||||||||||
Sbjct: 54 cggcaaagcgtttggattctgaaac 78
>35398_ame-mir-927:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccg 38
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37594_ngi-mir-927:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccg 38
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37624_nlo-mir-927:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccg 38
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37671_nvi-mir-927:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccg 38
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37807_tca-mir-927:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgtg 40
|||||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccgtg 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaa 75
||||||||||||||||||||||
Sbjct: 41 ggcaaagcgtttggattctgaa 62
>37808_tca-mir-927:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgtg 40
|||||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccgtg 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaa 75
||||||||||||||||||||||
Sbjct: 41 ggcaaagcgtttggattctgaa 62
>35088_api-mir-927:mirbase
Length = 59
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgt 39
||||||||||||||||||||||||
Sbjct: 1 tttagaattcctacgctttaccgt 24
