miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00950;mir-927;AABU01002771.1/5147485-5147408 7227:Drosophila
melanogaster (fruit fly)
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 7 ctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttg 60
Query: 67 gattctgaaaccctaccg 84
||||||||||||||||||
Sbjct: 61 gattctgaaaccctaccg 78
>RF00950;mir-927;AAIZ01011894.1/48584-48662 7234:Drosophila
persimilis
Length = 79
Score = 109 bits (55), Expect = 6e-24
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 8 tgtagagttttagaattcctacgctttaccgtggcata-cgaaattcggcaaagcgtttg 66
||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 2 tgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttg 61
Query: 67 gattctgaaacccta 81
|||||||||||||||
Sbjct: 62 gattctgaaacccta 76
>RF00950;mir-927;AAPP01018483.1/24548-24625 7217:Drosophila
ananassae
Length = 78
Score = 107 bits (54), Expect = 2e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 12 gagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattc 71
|||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||
Sbjct: 6 gagttttagaattcctacgctttaccgttgcatatgaaattaggcaaagcgtttggattc 65
Query: 72 tgaaacccta 81
|| |||||||
Sbjct: 66 tggaacccta 75
>RF00950;mir-927;AAQB01006885.1/24835-24758 7260:Drosophila
willistoni
Length = 78
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 9 gtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttgga 68
|||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||||
Sbjct: 3 gtagcgttttagaattcctacgctttaccgtcgcctacgaaactcggcaaagcgtttgga 62
Query: 69 ttctgaaac 77
|||||||||
Sbjct: 63 ttctgaaac 71
>RF00950;mir-927;AAPU01009479.1/6269-6192 7230:Drosophila
mojavensis
Length = 78
Score = 95.6 bits (48), Expect = 9e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattctg 73
|||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttaccgtcgtatacgcaatttggcaaagcgtttggattctg 67
Query: 74 aaac 77
||||
Sbjct: 68 aaac 71
>RF00950;mir-927;ABLF01004627.1/10448-10374 7029:Acyrthosiphon
pisum (pea aphid)
Length = 75
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccgt 39
||||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttaccgt 33
>RF00950;mir-927;AADK01018362.1/2317-2241 7091:Bombyx mori
(domestic silkworm)
Length = 77
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattctgaa 75
|||||||||||||||||||||||| || | | | || ||||||||||||||||||| ||
Sbjct: 10 tttagaattcctacgctttaccgttgc-caagtagttgggcaaagcgtttggattctaaa 68
Query: 76 ac 77
||
Sbjct: 69 ac 70
>RF00950;mir-927;AAZX01009215.1/528-602 7425:Nasonia vitripennis
(jewel wasp)
Length = 75
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccg 38
|||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttaccg 32
>RF00950;mir-927;AADG05003208.1/18292-18365 7460:Apis mellifera
(honey bee)
Length = 74
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttaccg 38
|||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttaccg 32
>RF00950;mir-927;AAGE02001795.1/170457-170536 7159:Aedes aegypti
(yellow fever mosquito)
Length = 80
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgtg 40
|||||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgtg 34
>RF00950;mir-927;ABKP02022054.1/6557-6479 377271:Anopheles gambiae
M
Length = 79
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 cggcaaagcgtttggattctgaaac 77
|||||||||||||||||||||||||
Sbjct: 48 cggcaaagcgtttggattctgaaac 72
>RF00950;mir-927;AAJJ01000142.1/38253-38326 7070:Tribolium
castaneum (red flour beetle)
Length = 74
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttaccgtg 40
|||||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgtg 34
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaa 75
||||||||||||||||||||||
Sbjct: 44 ggcaaagcgtttggattctgaa 65
>RF00950;mir-927;AAZO01006968.1/5753-5674 121224:Pediculus humanus
corporis (human body louse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttacc 37
||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttacc 31
