miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36479_dme-mir-929:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 agtcctggtggagctcaaattgactctagtagggagtcctttaatgagcgactccctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtcctggtggagctcaaattgactctagtagggagtcctttaatgagcgactccctaac 60
Query: 61 ggagtcagattgagctgcaaaggagcga 88
||||||||||||||||||||||||||||
Sbjct: 61 ggagtcagattgagctgcaaaggagcga 88
>37264_dsi-mir-929:mirbase
Length = 118
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 agtcctggtggagctcaaattgactctagtagggagtcctttaatgagcgactccctaac 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 agtcctggtgaagctcaaattgactctagtagggagtcctttaatgagcgactccctaac 78
Query: 61 ggagtcagattgagctgcaaaggagcga 88
|||||||||||||||| |||||||||||
Sbjct: 79 ggagtcagattgagctacaaaggagcga 106
>36980_dps-mir-929:mirbase
Length = 94
Score = 95.6 bits (48), Expect = 5e-21
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 15 tcaaattgactctagtagggagtcctttaat-gagcgactccctaacggagtcagattga 73
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 22 tcaaattgactctagtagggagtccttttattgagcgactccctaacggagtcagattga 81
>35319_aga-mir-929:mirbase
Length = 89
Score = 87.7 bits (44), Expect = 1e-18
Identities = 56/59 (94%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtcctttaat--gagcgactccctaacggagtcagattga 73
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
>35231_aae-mir-929-1:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 4e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcct--ttaatgagcgactccctaacggagtcagattga 73
||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
>35232_aae-mir-929-2:mirbase
Length = 89
Score = 65.9 bits (33), Expect = 4e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcct--ttaatgagcgactccctaacggagtcagattga 73
||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
>37809_tca-mir-929:mirbase
Length = 103
Score = 63.9 bits (32), Expect = 2e-11
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 15 tcaaattgactctagtagggagtcctttaat---gagcgactccctaacggagtcagatt 71
||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||
Sbjct: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
Query: 72 ga 73
||
Sbjct: 82 ga 83
>37810_tca-mir-929:mirbase
Length = 103
Score = 63.9 bits (32), Expect = 2e-11
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 15 tcaaattgactctagtagggagtcctttaat---gagcgactccctaacggagtcagatt 71
||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||
Sbjct: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
Query: 72 ga 73
||
Sbjct: 82 ga 83
>35089_api-mir-929:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtcctt 41
|||||||||||||||||||||||||
Sbjct: 1 aaattgactctagtagggagtcctt 25
>35401_ame-mir-929:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tcaaattgactctagtagggagtcc 39
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>37595_ngi-mir-929:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tcaaattgactctagtagggagtcc 39
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>37625_nlo-mir-929:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tcaaattgactctagtagggagtcc 39
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>37673_nvi-mir-929:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tcaaattgactctagtagggagtcc 39
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>35572_bmo-mir-929:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtcc 39
|||||||||||||||||||||||
Sbjct: 5 aaattgactctagtagggagtcc 27
