miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36516_dme-mir-970:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 gaaaggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatcta 60
Query: 61 tcataagacacacgcggctataaccgttgtctaag 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tcataagacacacgcggctataaccgttgtctaag 95
>37279_dsi-mir-970:mirbase
Length = 114
Score = 159 bits (80), Expect = 4e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 3 aaggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatctatc 62
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 15 aaggcatctgttgcagctagcgggtgttttatttggtagctgaattgatttgaatctatc 74
Query: 63 ataagacacacgcggctataaccgttgtctaa 94
|||||||||||||||||||||||| |||||||
Sbjct: 75 ataagacacacgcggctataaccgatgtctaa 106
>36989_dps-mir-970:mirbase
Length = 88
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 ggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatctatcat 64
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1 ggcatctgttgcagctagcgggtgttttatctggtagctgtacccttttgaatctatcat 60
Query: 65 aagacacacgcggctataaccg 86
||||||||||||||||| ||||
Sbjct: 61 aagacacacgcggctatgaccg 82
>35575_bmo-mir-970:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 aatctatcataagacacacgcggct 79
|||||||||||||||||||||||||
Sbjct: 52 aatctatcataagacacacgcggct 76
>37815_tca-mir-970:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 ctatcataagacacacgcggctat 81
||||||||||||||||||||||||
Sbjct: 54 ctatcataagacacacgcggctat 77
>37816_tca-mir-970:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 ctatcataagacacacgcggctat 81
||||||||||||||||||||||||
Sbjct: 54 ctatcataagacacacgcggctat 77
>35236_aae-mir-970:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tatcataagacacacgcggctat 81
|||||||||||||||||||||||
Sbjct: 63 tatcataagacacacgcggctat 85
>35323_aga-mir-970:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tatcataagacacacgcggctat 81
|||||||||||||||||||||||
Sbjct: 62 tatcataagacacacgcggctat 84
>36052_cqu-mir-970:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tatcataagacacacgcggctat 81
|||||||||||||||||||||||
Sbjct: 52 tatcataagacacacgcggctat 74
