miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36517_dme-mir-971:mirbase
          Length = 96

 Score =  190 bits (96), Expect = 1e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tccgtggctggcatcgctcgctgtaaattgtaatcatcaaagcgttttctcagagccgct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tccgtggctggcatcgctcgctgtaaattgtaatcatcaaagcgttttctcagagccgct 60

                                              
Query: 61 tggtgttacttcttacagtgagtgtgccagtccgta 96
          ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtgttacttcttacagtgagtgtgccagtccgta 96




>36990_dps-mir-971:mirbase
          Length = 94

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 66/77 (85%), Gaps = 2/77 (2%)
 Strand = Plus / Plus

                                                                      
Query: 12 catcgctcgctgtaaattgtaatcatcaaagcgttttctcag--agccgcttggtgttac 69
          |||||||||||||||||||||||   |||||| ||||    |  ||| ||||||||||||
Sbjct: 7  catcgctcgctgtaaattgtaatggccaaagcttttttgttggtagcagcttggtgttac 66

                           
Query: 70 ttcttacagtgagtgtg 86
          |||||||||||||||||
Sbjct: 67 ttcttacagtgagtgtg 83