miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36537_dme-mir-981:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 aaacatcctcactgaagtcgggtttcgttagcagcgggctgttttaataaattcaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaacatcctcactgaagtcgggtttcgttagcagcgggctgttttaataaattcaacaag 60
Query: 61 ttcgttgtcgacgaaacctgcatgctgtgtggaaaat 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcgttgtcgacgaaacctgcatgctgtgtggaaaat 97
>37286_dsi-mir-981:mirbase
Length = 117
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 aaacatcctcactgaagtcgggtttcgttagcagcgggctgttttaataaattcaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 aaacatcctcactgaagtcgggtttcgttagcagcgggctgttttaataaattcaacaag 68
Query: 61 ttcgttgtcgacgaaacctgcatgctgtgtggaaaat 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttcgttgtcgacgaaacctgcatgctgtgtggaaaat 105
>36992_dps-mir-981:mirbase
Length = 89
Score = 107 bits (54), Expect = 1e-24
Identities = 77/82 (93%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 13 tgaagtcgggtttcgttagcagcgggctgtttt-aataaattcaacaagttcgttgtcga 71
|||| ||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 8 tgaaatcgggtttcgttaacagcgggctgttatgaataaat-caacaagttcgttgtcga 66
Query: 72 cgaaacctgcatgctgtgtgga 93
||||||||||||||||||||||
Sbjct: 67 cgaaacctgcatgctgtgtgga 88
>35036_dpu-mir-981:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 gttcgttgtcgacgaaacctgcat 83
||||||||||||||||||||||||
Sbjct: 60 gttcgttgtcgacgaaacctgcat 83
>35238_aae-mir-981:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 agttcgttgtcgacgaaacctgca 82
||||||||||||||||||||||||
Sbjct: 56 agttcgttgtcgacgaaacctgca 79
>36054_cqu-mir-981:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 agttcgttgtcgacgaaacctgca 82
||||||||||||||||||||||||
Sbjct: 60 agttcgttgtcgacgaaacctgca 83
>37819_tca-mir-981:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 gttcgttgtcgacgaaacctgca 82
|||||||||||||||||||||||
Sbjct: 60 gttcgttgtcgacgaaacctgca 82
>38891_lgi-mir-981:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 gttcgttgtcgacgaaacctgc 81
||||||||||||||||||||||
Sbjct: 42 gttcgttgtcgacgaaacctgc 63
>35324_aga-mir-981:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 ttcgttgtcgacgaaacctgca 82
||||||||||||||||||||||
Sbjct: 63 ttcgttgtcgacgaaacctgca 84
