miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36539_dme-mir-982:mirbase
          Length = 93

 Score =  184 bits (93), Expect = 7e-48
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cgaaatcatgttagatcctggacaaatatgaagtaaattgtttttatgcatcaattactt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cgaaatcatgttagatcctggacaaatatgaagtaaattgtttttatgcatcaattactt 60

                                           
Query: 61 gatattcatccttgaactaaatggttttagagc 93
          |||||||||||||||||||||||||||||||||
Sbjct: 61 gatattcatccttgaactaaatggttttagagc 93




>37289_dsi-mir-982c:mirbase
          Length = 105

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                      
Query: 1  cgaaatcatgttagatcctggacaaatatgaagtaaattgtttttatgcatcaattactt 60
          ||||||||||  ||||| ||||||||||| ||||| ||| || |||| ||||||||  ||
Sbjct: 11 cgaaatcatgcgagatcttggacaaatatcaagtagattattattatacatcaatttatt 70

                                       
Query: 61 gatattcatccttgaactaaatggtttta 89
          | ||||  |||||||||| ||| ||||||
Sbjct: 71 gttatttgtccttgaacttaattgtttta 99