miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36549_dme-mir-986:mirbase
          Length = 100

 Score =  198 bits (100), Expect = 5e-52
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacacctgaaattacccatctcgaatagcgttgtgactgaggtaactgcgcatcgaatct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cacacctgaaattacccatctcgaatagcgttgtgactgaggtaactgcgcatcgaatct 60

                                                   
Query: 61  actcagcggcgaggctattcaagtaaggttattttgggcc 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  actcagcggcgaggctattcaagtaaggttattttgggcc 100




>37291_dsi-mir-986:mirbase
          Length = 114

 Score =  190 bits (96), Expect = 1e-49
 Identities = 99/100 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacacctgaaattacccatctcgaatagcgttgtgactgaggtaactgcgcatcgaatct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  cacacctgaaattacccatctcgaatagcgttgtgactgaggtaactgcgcatcgaatct 70

                                                   
Query: 61  actcagcggcgaggctattcaagtaaggttattttgggcc 100
           |||||||||||||||||||||||||||||| |||||||||
Sbjct: 71  actcagcggcgaggctattcaagtaaggttgttttgggcc 110




>36993_dps-mir-986:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 14 acccatctcgaatagcgttgtgactga 40
          |||| ||||||||||||||||||||||
Sbjct: 10 acccgtctcgaatagcgttgtgactga 36