miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36073_dan-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-ttttttatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>36150_der-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>36315_dme-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>36316_dme-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>36821_dpe-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-ttttttatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>36897_dps-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-ttttttatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>37109_dse-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>37188_dsi-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>37325_dvi-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tatttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>37400_dwi-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>37478_dya-bantam:mirbase
Length = 81
Score = 111 bits (56), Expect = 8e-26
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>36232_dgr-bantam:mirbase
Length = 81
Score = 103 bits (52), Expect = 2e-23
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgnnnnnnnatacaagtgagatca 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcagacaagtgagatca 59
Query: 61 ttttgaaagctgattttgtcaa 82
||||||||||||||||||||||
Sbjct: 60 ttttgaaagctgattttgtcaa 81
>35268_aga-bantam:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 acaagtgagatcattttgaaagctgattttgt 79
||||||||||||| ||||||||||||||||||
Sbjct: 65 acaagtgagatcactttgaaagctgattttgt 96
>35163_aae-bantam:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 agtgagatcattttgaaagctgatttt 77
|||||||||||||||||||||||||||
Sbjct: 45 agtgagatcattttgaaagctgatttt 71
>35164_aae-bantam:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 agtgagatcattttgaaagctgatttt 77
|||||||||||||||||||||||||||
Sbjct: 45 agtgagatcattttgaaagctgatttt 71
>36001_cqu-bantam:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 agtgagatcattttgaaagctgatttt 77
|||||||||||||||||||||||||||
Sbjct: 44 agtgagatcattttgaaagctgatttt 70
>34957_isc-bantam:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tgagatcattttgaaagctgattttgt 79
|||||||||| ||||||||||||||||
Sbjct: 61 tgagatcattgtgaaagctgattttgt 87
>34994_dpu-bantam:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tgagatcattttgaaagctgattttgt 79
|||||||||| ||||||||||||||||
Sbjct: 61 tgagatcattgtgaaagctgattttgt 87
>35336_ame-bantam:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tgagatcattttgaaagctgattttgt 79
|||||||||| ||||||||||||||||
Sbjct: 50 tgagatcattgtgaaagctgattttgt 76
>37628_nvi-bantam:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tgagatcattttgaaagctgattttgt 79
|||||||||| ||||||||||||||||
Sbjct: 50 tgagatcattgtgaaagctgattttgt 76
>37681_tca-bantam:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tgagatcattttgaaagctgattttgt 79
|||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78
>37682_tca-bantam:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tgagatcattttgaaagctgattttgt 79
|||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78
