miRNEST 2.0, an integrative microRNA resource :: BLAST
>55084_zma-miR396m:pmrd
Length = 227
Score = 313 bits (158), Expect = 3e-86
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 79 gacggaatgattggctcctcccagtcccagtcccagtcccacccaccaattctcttcccc 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gacggaatgattggctcctcccagtcccagtcccagtcccacccaccaattctcttcccc 129
Query: 139 ccgaccggccgtgaattgaattgaatcgaatcgcatcgctgagcttccccccggctcgct 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ccgaccggccgtgaattgaattgaatcgaatcgcatcgctgagcttccccccggctcgct 189
Query: 199 cacgcgacctgttgatggttcaagaaagcccatggaaa 236
||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cacgcgacctgttgatggttcaagaaagcccatggaaa 227
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 tttccacaggctttcttgaactgtgaactc 39
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>48951_osa-miR396e:pmrd
Length = 184
Score = 77.8 bits (39), Expect = 4e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 cgggcatgctttccacaggctttcttgaactgtgaactc 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgggcatgctttccacaggctttcttgaactgtgaactc 40
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 205 acctgttgatggttcaagaaagcccatggaaaccatgc 242
||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acctgttgatggttcaagaaagcccatggaaaccatgc 181
>48950_osa-miR396e:pmrd
Length = 184
Score = 77.8 bits (39), Expect = 4e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 cgggcatgctttccacaggctttcttgaactgtgaactc 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgggcatgctttccacaggctttcttgaactgtgaactc 40
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 205 acctgttgatggttcaagaaagcccatggaaaccatgc 242
||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acctgttgatggttcaagaaagcccatggaaaccatgc 181
>48949_osa-miR396e:pmrd
Length = 184
Score = 77.8 bits (39), Expect = 4e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 cgggcatgctttccacaggctttcttgaactgtgaactc 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgggcatgctttccacaggctttcttgaactgtgaactc 40
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 205 acctgttgatggttcaagaaagcccatggaaaccatgc 242
||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acctgttgatggttcaagaaagcccatggaaaccatgc 181
>48948_osa-miR396d:pmrd
Length = 142
Score = 77.8 bits (39), Expect = 4e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 cgggcatgctttccacaggctttcttgaactgtgaactc 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cgggcatgctttccacaggctttcttgaactgtgaactc 48
>54488_sbi-miR396e:pmrd
Length = 189
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 205 acctgttgatggttcaagaaagcccatggaaac 237
|||||||||||||||||||||||||||||||||
Sbjct: 157 acctgttgatggttcaagaaagcccatggaaac 189
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 tttccacaggctttcttgaactgtgaactc 39
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>55085_zma-miR396n:pmrd
Length = 186
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 205 acctgttgatggttcaagaaagcccatggaaa 236
||||||||||||||||||||||||||||||||
Sbjct: 155 acctgttgatggttcaagaaagcccatggaaa 186
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 tttccacaggctttcttgaactgtgaactc 39
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>55076_zma-miR396e:pmrd
Length = 186
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 205 acctgttgatggttcaagaaagcccatggaaa 236
||||||||||||||||||||||||||||||||
Sbjct: 155 acctgttgatggttcaagaaagcccatggaaa 186
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 tttccacaggctttcttgaactgtgaactc 39
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>55075_zma-miR396d:pmrd
Length = 186
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 205 acctgttgatggttcaagaaagcccatggaaa 236
||||||||||||||||||||||||||||||||
Sbjct: 155 acctgttgatggttcaagaaagcccatggaaa 186
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 tttccacaggctttcttgaactgtgaactc 39
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>48954_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 catgctttccacaggctttcttgaactgtgaactc 39
|||||| ||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactc 37
>48953_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 catgctttccacaggctttcttgaactgtgaactc 39
|||||| ||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactc 37
>48952_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 catgctttccacaggctttcttgaactgtgaactc 39
|||||| ||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactc 37
>48797_oru-miR396:pmrd
Length = 178
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 catgctttccacaggctttcttgaactgtgaactc 39
|||||| ||||||||||||||||||||||||||||
Sbjct: 4 catgctctccacaggctttcttgaactgtgaactc 38
>48480_far-miR396:pmrd
Length = 99
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 catgctttccacaggctttcttgaactgtgaactc 39
|||||| ||||||||||||||||||||||||||||
Sbjct: 11 catgctctccacaggctttcttgaactgtgaactc 45
>48651_hvu-miR396:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 5 catgctttccacaggctttcttgaactgtgaactc 39
|||||| |||||||||||||||||||||| |||||
Sbjct: 6 catgctctccacaggctttcttgaactgtcaactc 40
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 209 gttgatggttcaagaaagcccatggaaaccatgc 242
|||||||||||||||||| || |||||| |||||
Sbjct: 70 gttgatggttcaagaaagtccttggaaaacatgc 103
>48956_osa-miR396h:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tttccacaggctttcttgaac 30
|||||||||||||||||||||
Sbjct: 109 tttccacaggctttcttgaac 129
>48955_osa-miR396g:pmrd
Length = 181
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tttccacaggctttcttgaac 30
|||||||||||||||||||||
Sbjct: 149 tttccacaggctttcttgaac 169
>48957_osa-miR396i:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacaggctttcttgaac 30
||||||||||||||||||||
Sbjct: 90 ttccacaggctttcttgaac 109
>48506_ghr-miR396a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacaggctttcttgaac 30
||||||||||||||||||||
Sbjct: 66 ttccacaggctttcttgaac 85
