miRNEST 2.0, an integrative microRNA resource :: BLAST
>55084_zma-miR396m:pmrd
Length = 227
Score = 313 bits (158), Expect = 3e-86
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 80 gacggaatgattggctcctcccagtcccagtcccagtcccacccaccaattctcttcccc 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gacggaatgattggctcctcccagtcccagtcccagtcccacccaccaattctcttcccc 129
Query: 140 ccgaccggccgtgaattgaattgaatcgaatcgcatcgctgagcttccccccggctcgct 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ccgaccggccgtgaattgaattgaatcgaatcgcatcgctgagcttccccccggctcgct 189
Query: 200 cacgcgacctgttgatggttcaagaaagcccatggaaa 237
||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cacgcgacctgttgatggttcaagaaagcccatggaaa 227
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 tttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>48951_osa-miR396e:pmrd
Length = 184
Score = 79.8 bits (40), Expect = 9e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 206 acctgttgatggttcaagaaagcccatggaaaccatgc 243
||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acctgttgatggttcaagaaagcccatggaaaccatgc 181
>48950_osa-miR396e:pmrd
Length = 184
Score = 79.8 bits (40), Expect = 9e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 206 acctgttgatggttcaagaaagcccatggaaaccatgc 243
||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acctgttgatggttcaagaaagcccatggaaaccatgc 181
>48949_osa-miR396e:pmrd
Length = 184
Score = 79.8 bits (40), Expect = 9e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 206 acctgttgatggttcaagaaagcccatggaaaccatgc 243
||||||||||||||||||||||||||||||||||||||
Sbjct: 144 acctgttgatggttcaagaaagcccatggaaaccatgc 181
>48948_osa-miR396d:pmrd
Length = 142
Score = 79.8 bits (40), Expect = 9e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gcgggcatgctttccacaggctttcttgaactgtgaactc 48
>54488_sbi-miR396e:pmrd
Length = 189
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 206 acctgttgatggttcaagaaagcccatggaaac 238
|||||||||||||||||||||||||||||||||
Sbjct: 157 acctgttgatggttcaagaaagcccatggaaac 189
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 tttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>55085_zma-miR396n:pmrd
Length = 186
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 206 acctgttgatggttcaagaaagcccatggaaa 237
||||||||||||||||||||||||||||||||
Sbjct: 155 acctgttgatggttcaagaaagcccatggaaa 186
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 tttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>55076_zma-miR396e:pmrd
Length = 186
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 206 acctgttgatggttcaagaaagcccatggaaa 237
||||||||||||||||||||||||||||||||
Sbjct: 155 acctgttgatggttcaagaaagcccatggaaa 186
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 tttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>55075_zma-miR396d:pmrd
Length = 186
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 206 acctgttgatggttcaagaaagcccatggaaa 237
||||||||||||||||||||||||||||||||
Sbjct: 155 acctgttgatggttcaagaaagcccatggaaa 186
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 tttccacaggctttcttgaactgtgaactc 40
||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactc 30
>48480_far-miR396:pmrd
Length = 99
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
|||| |||||| ||||||||||||||||||||||||||||
Sbjct: 6 gcggccatgctctccacaggctttcttgaactgtgaactc 45
>48954_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 catgctttccacaggctttcttgaactgtgaactc 40
|||||| ||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactc 37
>48953_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 catgctttccacaggctttcttgaactgtgaactc 40
|||||| ||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactc 37
>48952_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 catgctttccacaggctttcttgaactgtgaactc 40
|||||| ||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactc 37
>48797_oru-miR396:pmrd
Length = 178
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 catgctttccacaggctttcttgaactgtgaactc 40
|||||| ||||||||||||||||||||||||||||
Sbjct: 4 catgctctccacaggctttcttgaactgtgaactc 38
>48651_hvu-miR396:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 gcgggcatgctttccacaggctttcttgaactgtgaactc 40
|||| |||||| |||||||||||||||||||||| |||||
Sbjct: 1 gcggccatgctctccacaggctttcttgaactgtcaactc 40
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 210 gttgatggttcaagaaagcccatggaaaccatgc 243
|||||||||||||||||| || |||||| |||||
Sbjct: 70 gttgatggttcaagaaagtccttggaaaacatgc 103
>48956_osa-miR396h:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tttccacaggctttcttgaac 31
|||||||||||||||||||||
Sbjct: 109 tttccacaggctttcttgaac 129
>48955_osa-miR396g:pmrd
Length = 181
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tttccacaggctttcttgaac 31
|||||||||||||||||||||
Sbjct: 149 tttccacaggctttcttgaac 169
>48957_osa-miR396i:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 ttccacaggctttcttgaac 31
||||||||||||||||||||
Sbjct: 90 ttccacaggctttcttgaac 109
>48506_ghr-miR396a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 ttccacaggctttcttgaac 31
||||||||||||||||||||
Sbjct: 66 ttccacaggctttcttgaac 85
