miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36916_dps-mir-10:mirbase
Length = 77
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>36257_dgr-mir-10:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttgtacactagctttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>36353_dme-mir-10:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttttatactagctttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>36354_dme-mir-10:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttttatactagctttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>37129_dse-mir-10:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttttatactagctttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>37205_dsi-mir-10:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttttatactagctttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>36169_der-mir-10:mirbase
Length = 77
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 3 acgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttcta 62
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 3 acgtctaccctgtagatccgaatttgttttatactagctttaaggacaaattcggttcta 62
Query: 63 gagaggtttgtgtgg 77
|||||||||||||||
Sbjct: 63 gagaggtttgtgtgg 77
>36091_dan-mir-10:mirbase
Length = 77
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttttatactagttttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>37498_dya-mir-10:mirbase
Length = 77
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttttatactagttttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
|||||||||||||||||
Sbjct: 61 tagagaggtttgtgtgg 77
>36767_dmo-mir-10:mirbase
Length = 77
Score = 121 bits (61), Expect = 7e-29
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1 ccacgtctaccctgtagatccgaatttgttgtaccatagctttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
||||||||||| |||||
Sbjct: 61 tagagaggtttatgtgg 77
>37343_dvi-mir-10:mirbase
Length = 77
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 ccacgtctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttc 60
||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 1 ccacgtccaccctgtagatccgaatttgttgtacactagttttaaggacaaattcggttc 60
Query: 61 tagagaggtttgtgtgg 77
||||||||||| |||||
Sbjct: 61 tagagaggtttctgtgg 77
>37420_dwi-mir-10:mirbase
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 3 acgtctaccctgtagatccgaatttgttttacattag-ctttaaggacaaattcggttct 61
||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||
Sbjct: 3 acgtctaccctgtagatccgaatttgttttatactagtttttaaggacaaattcggttct 62
Query: 62 agagaggttt 71
||||||||||
Sbjct: 63 agagaggttt 72
>35278_aga-mir-10:mirbase
Length = 102
Score = 65.9 bits (33), Expect = 4e-12
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 9 accctgtagatccgaatttgttttacattagctttaaggacaaattcggttctagagagg 68
||||||||||||||||||||||| | ||| || || |||||||||||||||||||||
Sbjct: 22 accctgtagatccgaatttgtttgaatttatatt-aataacaaattcggttctagagagg 80
Query: 69 tttgtgtgg 77
|||||||||
Sbjct: 81 tttgtgtgg 89
>35050_api-mir-10:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 47 gacaaattcggttctagagaggtttgtgtgg 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgttt 31
||||||||||||||||||||||||||
Sbjct: 11 tctaccctgtagatccgaatttgttt 36
>35177_aae-mir-10:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 53 gacaaattcggttctagagaggtttgtgtgg 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgttt 31
||||||||||||||||||||||||||
Sbjct: 12 tctaccctgtagatccgaatttgttt 37
>35348_ame-mir-10-1:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 55 gacaaattcggttctagagaggtttgtgtgg 85
>35349_ame-mir-10-2:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 55 gacaaattcggttctagagaggtttgtgtgg 85
>35523_bmo-mir-10:mirbase
Length = 84
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 48 gacaaattcggttctagagaggtttgtgtgg 78
>36008_cqu-mir-10:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 50 gacaaattcggttctagagaggtttgtgtgg 80
>37604_nlo-mir-10:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 55 gacaaattcggttctagagaggtttgtgtgg 85
>37637_nvi-mir-10:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||||||||||
Sbjct: 55 gacaaattcggttctagagaggtttgtgtgg 85
>37705_tca-mir-10:mirbase
Length = 71
Score = 58.0 bits (29), Expect = 9e-10
Identities = 59/69 (85%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttctagag 65
|||||||||||||||||||||||||| | || || |||||||||||||||||||
Sbjct: 8 tctaccctgtagatccgaatttgtttgaaatcaggc-----gacaaattcggttctagag 62
Query: 66 aggtttgtg 74
|||||||||
Sbjct: 63 aggtttgtg 71
>37706_tca-mir-10:mirbase
Length = 71
Score = 58.0 bits (29), Expect = 9e-10
Identities = 59/69 (85%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgttttacattagctttaaggacaaattcggttctagag 65
|||||||||||||||||||||||||| | || || |||||||||||||||||||
Sbjct: 8 tctaccctgtagatccgaatttgtttgaaatcaggc-----gacaaattcggttctagag 62
Query: 66 aggtttgtg 74
|||||||||
Sbjct: 63 aggtttgtg 71
>35001_dpu-mir-10:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggtttgtgtgg 77
|||||||||||||||||||||||| ||||||
Sbjct: 55 gacaaattcggttctagagaggttcgtgtgg 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 18 tctaccctgtagatccgaatttgt 41
>37563_lmi-mir-10:mirbase
Length = 59
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgttttacat 36
|||||||||||||||||||||||| ||||
Sbjct: 1 taccctgtagatccgaatttgtttgacat 29
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 47 gacaaattcggttctagagaggttt 71
|||||||||||||||||||||||||
Sbjct: 35 gacaaattcggttctagagaggttt 59
>34866_sko-mir-10:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 18 tctaccctgtagatccgaatttgt 41
>34964_isc-mir-10:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||||||||||
Sbjct: 6 tctaccctgtagatccgaatttgt 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 48 acaaattcggttctagagagg-tttgtgtgg 77
||||||||||||||||||||| |||||||||
Sbjct: 43 acaaattcggttctagagaggctttgtgtgg 73
>38853_lgi-mir-10:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 acgtctaccctgtagatccgaatttgt 29
|||| ||||||||||||||||||||||
Sbjct: 16 acgtttaccctgtagatccgaatttgt 42
>24650_bfl-mir-10a:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 8 taccctgtagatccgaatttgt 29
>25694_xtr-mir-10a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>25889_gga-mir-10a:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 8 taccctgtagatccgaatttgt 29
>26621_cfa-mir-10:mirbase
Length = 63
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 1 taccctgtagatccgaatttgt 22
>26943_eca-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>27331_mdo-mir-10a:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 15 taccctgtagatccgaatttgt 36
>27477_age-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>27587_sla-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>27648_mml-mir-10a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>28256_ggo-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>28358_hsa-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>30040_ppa-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>30144_ptr-mir-10a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 21 taccctgtagatccgaatttgt 42
>31423_oan-mir-10a:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 28 taccctgtagatccgaatttgt 49
>31773_mmu-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>32655_rno-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>32656_rno-mir-10a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>33126_bta-mir-10a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 22 taccctgtagatccgaatttgt 43
>33909_ssc-mir-10a:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 9 taccctgtagatccgaatttgt 30
>34197_dre-mir-10a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 taccctgtagatccgaatttgt 29
||||||||||||||||||||||
Sbjct: 18 taccctgtagatccgaatttgt 39
>34809_spu-mir-10:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 accctgtagatccgaatttgt 29
|||||||||||||||||||||
Sbjct: 27 accctgtagatccgaatttgt 47
>34543_fru-mir-10c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||| ||||||
Sbjct: 13 tctaccctgtagatccggatttgt 36
>34691_tni-mir-10c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 tctaccctgtagatccgaatttgt 29
||||||||||||||||| ||||||
Sbjct: 19 tctaccctgtagatccggatttgt 42
