miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36832_dpe-mir-6-1:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 6 agtagagagaatagttgctgtgctatatgtccttcgactctatatatcacagtggctgtt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtagagagaatagttgctgtgctatatgtccttcgactctatatatcacagtggctgtt 60
Query: 66 ctttttgta 74
|||||||||
Sbjct: 61 ctttttgta 69
>36337_dme-mir-6-1:mirbase
Length = 82
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgtacctaaa 80
|||||||||||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttctttttgtacctaaa 82
>36338_dme-mir-6-1:mirbase
Length = 82
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgtacctaaa 80
|||||||||||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttctttttgtacctaaa 82
>36161_der-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
>36246_dgr-mir-6-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 44 tatatcacagtggctgttctttttgta 70
>36249_dgr-mir-6-4:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 44 tatatcacagtggctgttctttttgta 70
>36759_dmo-mir-6-1:mirbase
Length = 66
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 40 tatatcacagtggctgttctttttgta 66
>37121_dse-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 agtagagagaatagttgctgtgct 29
||||||| ||||||||||||||||
Sbjct: 1 agtagagggaatagttgctgtgct 24
>37199_dsi-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 agtagagagaatagttgctgtgct 29
||||||| ||||||||||||||||
Sbjct: 1 agtagagggaatagttgctgtgct 24
>37335_dvi-mir-6-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 44 tatatcacagtggctgttctttttgta 70
>37489_dya-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttgta 74
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 7 gtagagagaatagttgctgtgct 29
|||||| ||||||||||||||||
Sbjct: 2 gtagagggaatagttgctgtgct 24
>37337_dvi-mir-6-3:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 42 actctatatatcacagtggctgttcttttt 71
||||| ||||||||||||||||||||||||
Sbjct: 41 actctttatatcacagtggctgttcttttt 70
>36083_dan-mir-6-1:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 41 tatatcacagtggctgttctttttg 65
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 aagtagagagaatagttgctgtgct 29
|||||||||||||||| ||||||||
Sbjct: 1 aagtagagagaatagtggctgtgct 25
>36084_dan-mir-6-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 56 tatatcacagtggctgttctttttg 80
>36162_der-mir-6-2:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttg 69
>36247_dgr-mir-6-2:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttctttttg 75
>36250_dgr-mir-6-5:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttctttttg 75
>36339_dme-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>36340_dme-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>36760_dmo-mir-6-2:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 53 tatatcacagtggctgttctttttg 77
>36834_dpe-mir-6-3:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 56 tatatcacagtggctgttctttttg 80
>36909_dps-mir-6-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 56 tatatcacagtggctgttctttttg 80
>37122_dse-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>37200_dsi-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>37410_dwi-mir-6-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 atatcacagtggctgttctttttgt 73
|||||||||||||||||||||||||
Sbjct: 44 atatcacagtggctgttctttttgt 68
>37411_dwi-mir-6-2:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 67 tatatcacagtggctgttctttttg 91
>37412_dwi-mir-6-3:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 47 atatatcacagtggctgttcttttt 71
|||||||||||||||||||||||||
Sbjct: 49 atatatcacagtggctgttcttttt 73
>37490_dya-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttctttttg 72
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>36085_dan-mir-6-3:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 47 tatatcacagtggctgttcttttt 70
>36163_der-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36248_dgr-mir-6-3:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 48 tatatcacagtggctgttcttttt 71
>36251_dgr-mir-6-6:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 48 tatatcacagtggctgttcttttt 71
>36341_dme-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36342_dme-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36761_dmo-mir-6-3:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttcttttt 73
>36833_dpe-mir-6-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36910_dps-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>37123_dse-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>37201_dsi-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>37336_dvi-mir-6-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 atatcacagtggctgttctttttg 72
||||||||||||||||||||||||
Sbjct: 53 atatcacagtggctgttctttttg 76
>37491_dya-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tatatcacagtggctgttcttttt 71
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
