miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36834_dpe-mir-6-3:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 ccaaccgcagggaaccgctgctgctgatatattatccacccatctttgacatttctatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaccgcagggaaccgctgctgctgatatattatccacccatctttgacatttctatat 60
Query: 61 cacagtggctgttctttttggtt 83
|||||||||||||||||||||||
Sbjct: 61 cacagtggctgttctttttggtt 83
>37411_dwi-mir-6-2:mirbase
Length = 94
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 52 tttctatatcacagtggctgttctttttggtt 83
||||||||||||||||||||||||||||||||
Sbjct: 63 tttctatatcacagtggctgttctttttggtt 94
>37490_dya-mir-6-2:mirbase
Length = 74
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 53 ttctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||||
Sbjct: 43 ttctatatcacagtggctgttctttttggtt 73
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 aaccgcagggaaccgctgctgctgatatattat 35
|||||||||||||| ||||||||||||||||||
Sbjct: 2 aaccgcagggaacctctgctgctgatatattat 34
>36760_dmo-mir-6-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttggtt 83
||||||||||||||||||||||||||||||
Sbjct: 51 tctatatcacagtggctgttctttttggtt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 aaccgcagggaaccgctgctgctgatata 31
||||||||||||| |||||||||||||||
Sbjct: 2 aaccgcagggaactgctgctgctgatata 30
>36162_der-mir-6-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||
Sbjct: 44 ctatatcacagtggctgttctttttggtt 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 aaccgcagggaaccgctgctgctgatatattat 35
|||| ||||||||| ||||||||||||||||||
Sbjct: 2 aaccccagggaacctctgctgctgatatattat 34
>36247_dgr-mir-6-2:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||
Sbjct: 50 ctatatcacagtggctgttctttttggtt 78
>36250_dgr-mir-6-5:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||
Sbjct: 50 ctatatcacagtggctgttctttttggtt 78
>36339_dme-mir-6-2:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||
Sbjct: 45 ctatatcacagtggctgttctttttggtt 73
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 agggaaccgctgctgctgatatattat 35
||||||| ||||||||||||||||||
Sbjct: 8 agggaacttctgctgctgatatattat 34
>36340_dme-mir-6-2:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||
Sbjct: 45 ctatatcacagtggctgttctttttggtt 73
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 agggaaccgctgctgctgatatattat 35
||||||| ||||||||||||||||||
Sbjct: 8 agggaacttctgctgctgatatattat 34
>37122_dse-mir-6-2:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||
Sbjct: 45 ctatatcacagtggctgttctttttggtt 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 3 aaccgcagggaaccgctgctgctgatatattat 35
|||| |||||||| ||||||||||||||||||
Sbjct: 2 aaccccagggaacttctgctgctgatatattat 34
>37200_dsi-mir-6-2:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||||
Sbjct: 45 ctatatcacagtggctgttctttttggtt 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 3 aaccgcagggaaccgctgctgctgatatattat 35
|||| |||||||| ||||||||||||||||||
Sbjct: 2 aaccccagggaacttctgctgctgatatattat 34
>36083_dan-mir-6-1:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 39 tctatatcacagtggctgttctttttg 65
>36084_dan-mir-6-2:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 55 ctatatcacagtggctgttctttttgg 81
|||||||||||||||||||||||||||
Sbjct: 55 ctatatcacagtggctgttctttttgg 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 8 cagggaaccgctgctgctgatatattat 35
|||||||| | |||||||||||||||||
Sbjct: 7 cagggaactgttgctgctgatatattat 34
>36161_der-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 43 tctatatcacagtggctgttctttttg 69
>36246_dgr-mir-6-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 42 tctatatcacagtggctgttctttttg 68
>36249_dgr-mir-6-4:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 42 tctatatcacagtggctgttctttttg 68
>36337_dme-mir-6-1:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 48 tctatatcacagtggctgttctttttg 74
>36338_dme-mir-6-1:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 48 tctatatcacagtggctgttctttttg 74
>37121_dse-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 43 tctatatcacagtggctgttctttttg 69
>37199_dsi-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 43 tctatatcacagtggctgttctttttg 69
>37335_dvi-mir-6-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 42 tctatatcacagtggctgttctttttg 68
>37336_dvi-mir-6-2:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 57 atatcacagtggctgttctttttggtt 83
|||||||||||||||||||||||||||
Sbjct: 53 atatcacagtggctgttctttttggtt 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 aaccgcagggaaccgctgctgctgatata 31
||||||||||||| |||||||||||||||
Sbjct: 2 aaccgcagggaactgctgctgctgatata 30
>37489_dya-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tctatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||||
Sbjct: 43 tctatatcacagtggctgttctttttg 69
>36759_dmo-mir-6-1:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||
Sbjct: 40 tatatcacagtggctgttctttttg 64
>36832_dpe-mir-6-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||
Sbjct: 43 tatatcacagtggctgttctttttg 67
>36908_dps-mir-6-1:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttctttttg 80
|||||||||||||||||||||||||
Sbjct: 48 tatatcacagtggctgttctttttg 72
>36085_dan-mir-6-3:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 47 tatatcacagtggctgttcttttt 70
>36163_der-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36248_dgr-mir-6-3:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 48 tatatcacagtggctgttcttttt 71
>36251_dgr-mir-6-6:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 48 tatatcacagtggctgttcttttt 71
>36341_dme-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36342_dme-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36761_dmo-mir-6-3:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttcttttt 73
>36833_dpe-mir-6-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>36910_dps-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>37123_dse-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>37201_dsi-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
>37337_dvi-mir-6-3:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 47 tatatcacagtggctgttcttttt 70
>37410_dwi-mir-6-1:mirbase
Length = 69
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 atatcacagtggctgttctttttg 80
||||||||||||||||||||||||
Sbjct: 44 atatcacagtggctgttctttttg 67
>37412_dwi-mir-6-3:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttcttttt 73
>37491_dya-mir-6-3:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tatatcacagtggctgttcttttt 79
||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttcttttt 74
