miRNEST 2.0, an integrative microRNA resource :: BLAST
>54940_zma-miR160c:pmrd
Length = 100
Score = 190 bits (96), Expect = 1e-49
Identities = 99/100 (99%)
Strand = Plus / Plus
Query: 4 aggatgtgcctggctccctgtatgccactcatctagagcaacgacagcttggtatggttg 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 aggatgtgcctggctccctgtatgccactcatctagagcaacgacagcttggtagggttg 60
Query: 64 cctataagatggatggcgtgcatggtgccaagcatatctc 103
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctataagatggatggcgtgcatggtgccaagcatatctc 100
>48828_osa-miR160c:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 7 atgtgcctggctccctgtatgccactcatctagagcaac 45
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgccactcatctagagcaac 42
>54406_sbi-miR160c:pmrd
Length = 83
Score = 69.9 bits (35), Expect = 3e-13
Identities = 76/88 (86%), Gaps = 5/88 (5%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactcatctagagcaacgacagcttggtatggttgcctata 69
||||||||||||||||||||||||||||||| || ||| || |||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcatctagatca---acaactacctatggttgcctat- 56
Query: 70 agatggatggcgtgcatggtgccaagca 97
||||| ||||||||| |||||||||||
Sbjct: 57 -gatggttggcgtgcacggtgccaagca 83
>54759_ttu-miR160a:pmrd
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactcatctagagcaac 45
||||||||||||||||||||||||||| ||||||||
Sbjct: 1 tgcctggctccctgtatgccactcatccagagcaac 36
>48827_osa-miR160b:pmrd
Length = 139
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 gtgcctggctccctgtatgccactcat 35
|||||||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccactcat 55
>48832_osa-miR160m:pmrd
Length = 82
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactcat 35
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>48826_osa-miR160a:pmrd
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 8 tgtgcctggctccctgtatgccactcatctagagcaac 45
|||||||||||||||||||||||| ||| |||| ||||
Sbjct: 2 tgtgcctggctccctgtatgccacacatgtagaccaac 39
>54675_tae-miR160:pmrd
Length = 148
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggatgtgcctggctccctgtatgccactc 33
|||| ||||||||||||||||||||||||
Sbjct: 17 ggatatgcctggctccctgtatgccactc 45
>48829_osa-miR160d:pmrd
Length = 142
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggatgtgcctggctccctgtatgccactc 33
|||| ||||||||||||||||||||||||
Sbjct: 3 ggatatgcctggctccctgtatgccactc 31
>48791_oba-miR160:pmrd
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tgtgcctggctccctgtatgccact 32
|||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccact 26
>54946_zma-miR160i:pmrd
Length = 81
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactc 33
||||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccactc 25
>54942_zma-miR160e:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactc 33
||||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccactc 32
>54941_zma-miR160d:pmrd
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactc 33
||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccactc 44
>54939_zma-miR160b:pmrd
Length = 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tgtgcctggctccctgtatgccac 31
||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccac 42
>54780_vvi-miR160c:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tgtgcctggctccctgtatgccac 31
||||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgccac 32
>54408_sbi-miR160e:pmrd
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactc 33
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>54407_sbi-miR160d:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactc 33
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>51610_ptc-miR160c:pmrd
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 atgtgcctggctccctgtatgcca 30
||||||||||||||||||||||||
Sbjct: 8 atgtgcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 atgtgcctggctccctgtatgcca 30
||||||||||||||||||||||||
Sbjct: 8 atgtgcctggctccctgtatgcca 31
>48833_osa-miR160n:pmrd
Length = 131
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccactc 33
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>48704_mtr-miR160e:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 atgtgcctggctccctgtatgcca 30
||||||||||||||||||||||||
Sbjct: 3 atgtgcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 atgtgcctggctccctgtatgcca 30
||||||||||||||||||||||||
Sbjct: 3 atgtgcctggctccctgtatgcca 26
>48542_gma-miR160a:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 atgtgcctggctccctgtatgcca 30
||||||||||||||||||||||||
Sbjct: 18 atgtgcctggctccctgtatgcca 41
>54938_zma-miR160a:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtgcctggctccctgtatgccac 31
|||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccac 31
>51363_ppt-miR160e:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccact 32
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>48703_mtr-miR160d:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tgtgcctggctccctgtatgcca 30
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtgcctggctccctgtatgccac 31
|||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccac 26
>46935_ath-miR160b:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtgcctggctccctgtatgccac 31
|||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccac 26
>54947_zma-miR160m:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54944_zma-miR160g:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54575_smo-miR160b:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>54405_sbi-miR160b:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54404_sbi-miR160a:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgccac 33
>51611_ptc-miR160d:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>51608_ptc-miR160a:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>51364_ppt-miR160f:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>51334_pga-miR160:pmrd
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>48658_hvv-miR160a:pmrd
Length = 344
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 ggatgtgcctggctccctgtatgcca 30
|||| |||||||||||||||||||||
Sbjct: 319 ggatatgcctggctccctgtatgcca 344
>46936_ath-miR160c:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgccac 31
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>54783_vvi-miR160f:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54781_vvi-miR160d:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54541_sly-miR160a:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gcctggctccctgtatgccac 31
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>48830_osa-miR160e:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ggatgtgcctggctccctgtatgcc 29
|||| ||||||||||||||||||||
Sbjct: 6 ggatatgcctggctccctgtatgcc 30
>48397_bra-miR160a:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>46865_aqc-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgcctggctccctgtatgcca 30
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
