miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36889_dpe-mir-314:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
Query: 61 acctctggtattcgagccaataagttcgg 89
|||||||||||||||||||||||||||||
Sbjct: 61 acctctggtattcgagccaataagttcgg 89
>36143_dan-mir-314:mirbase
Length = 88
Score = 129 bits (65), Expect = 4e-31
Identities = 84/89 (94%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
||||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatcag-tttggattttgtt 59
Query: 61 acctctggtattcgagccaataagttcgg 89
|||||||||||||||||||||||||||||
Sbjct: 60 acctctggtattcgagccaataagttcgg 88
>36225_der-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
||||||||||||||||||||||||||||||||||||||| | ||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
Query: 60 tacctctggtattcgagccaataagttcgg 89
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36465_dme-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
|||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 60 tacctctggtattcgagccaataagttcgg 89
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36466_dme-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
|||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 60 tacctctggtattcgagccaataagttcgg 89
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37181_dse-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaact-ccgaaatggattttgt 59
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 60 tacctctggtattcgagccaataagttcgg 89
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37257_dsi-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaact-ccgaaatggattttgt 59
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 60 tacctctggtattcgagccaataagttcgg 89
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37470_dwi-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccga-aatggattttgt 59
||||||||||||||||||||||||||||||||||||||||| | | | ||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaattcaatgttggattttgt 60
Query: 60 tacctctggtattcgagccaataagttcgg 89
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37550_dya-mir-314:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
||||||||||||||||||||||||||||||||||||||||| || | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaaccccatgtcggattttgt 60
Query: 60 tacctctggtattcgagccaataagttcgg 89
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37392_dvi-mir-314:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 50 tggattttgttacctctggtattcgagccaataagttcgg 89
||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 52 tggattttgttgcctttggtattcgagccaataagttcgg 91
>36308_dgr-mir-314:mirbase
Length = 76
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 ggtattcgagccaataagttcgg 89
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
>36814_dmo-mir-314:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tggtattcgagccaataagttcgg 89
||||||||||||||||||||||||
Sbjct: 72 tggtattcgagccaataagttcgg 95
