miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37263_dsi-mir-927:mirbase
Length = 92
Score = 111 bits (56), Expect = 8e-26
Identities = 72/76 (94%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 7 tgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttg 66
||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 9 tgtagagttttagaattcctacgctttaccgtggcata-cgaaattcggcaaagcgtttg 67
Query: 67 gattctgaaaccctat 82
||||||||||||||||
Sbjct: 68 gattctgaaaccctat 83
>36477_dme-mir-927:mirbase
Length = 92
Score = 109 bits (55), Expect = 3e-25
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 7 tgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttg 66
||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 8 tgtagagttttagaattcctacgctttaccgtggcata-cgaaattcggcaaagcgtttg 66
Query: 67 gattctgaaacccta 81
|||||||||||||||
Sbjct: 67 gattctgaaacccta 81
>36478_dme-mir-927:mirbase
Length = 92
Score = 109 bits (55), Expect = 3e-25
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 7 tgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttg 66
||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 8 tgtagagttttagaattcctacgctttaccgtggcata-cgaaattcggcaaagcgtttg 66
Query: 67 gattctgaaacccta 81
|||||||||||||||
Sbjct: 67 gattctgaaacccta 81
>35571_bmo-mir-927:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattctga 74
||||||||||||||||||||||||||| || | | || ||||||||||||||||||| |
Sbjct: 15 tttagaattcctacgctttaccgttgccaa--gtagttgggcaaagcgtttggattctaa 72
Query: 75 aac 77
|||
Sbjct: 73 aac 75
>35585_bmo-mir-1926:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Minus
Query: 15 tttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattctga 74
||||||||||||||||||||||||||| || | | || ||||||||||||||||||| |
Sbjct: 75 tttagaattcctacgctttaccgttgccaa--gtagttgggcaaagcgtttggattctaa 18
Query: 75 aac 77
|||
Sbjct: 17 aac 15
>35318_aga-mir-927:mirbase
Length = 93
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattc 71
||||||||||||||||||||||||| || || | | | |||||||||||||||||||
Sbjct: 13 tgttttagaattcctacgctttacccgtgattaaagtagtgcggcaaagcgtttggattc 72
Query: 72 tgaaac 77
||||||
Sbjct: 73 tgaaac 78
>35398_ame-mir-927:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccg 37
||||||||||||||||||||||||||
Sbjct: 19 tgttttagaattcctacgctttaccg 44
>37594_ngi-mir-927:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccg 37
||||||||||||||||||||||||||
Sbjct: 19 tgttttagaattcctacgctttaccg 44
>37624_nlo-mir-927:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccg 37
||||||||||||||||||||||||||
Sbjct: 19 tgttttagaattcctacgctttaccg 44
>37671_nvi-mir-927:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccg 37
||||||||||||||||||||||||||
Sbjct: 19 tgttttagaattcctacgctttaccg 44
>35088_api-mir-927:mirbase
Length = 59
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 1 tttagaattcctacgctttaccgt 24
>35230_aae-mir-927:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 8 tttagaattcctacgctttaccgt 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaaac 77
|||||||||||||| |||||||||
Sbjct: 48 ggcaaagcgtttgggttctgaaac 71
>37807_tca-mir-927:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccgt 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaa 75
||||||||||||||||||||||
Sbjct: 41 ggcaaagcgtttggattctgaa 62
>37808_tca-mir-927:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccgt 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaa 75
||||||||||||||||||||||
Sbjct: 41 ggcaaagcgtttggattctgaa 62
