miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36479_dme-mir-929:mirbase
Length = 88
Score = 95.6 bits (48), Expect = 5e-21
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccttttattgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcctttaat-gagcgactccctaacggagtcagattga 73
>36480_dme-mir-929:mirbase
Length = 88
Score = 95.6 bits (48), Expect = 5e-21
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccttttattgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcctttaat-gagcgactccctaacggagtcagattga 73
>37264_dsi-mir-929:mirbase
Length = 118
Score = 95.6 bits (48), Expect = 5e-21
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccttttattgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 33 tcaaattgactctagtagggagtcctttaat-gagcgactccctaacggagtcagattga 91
>35319_aga-mir-929:mirbase
Length = 89
Score = 93.7 bits (47), Expect = 2e-20
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
>35231_aae-mir-929-1:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
Query: 82 a 82
|
Sbjct: 76 a 76
>35232_aae-mir-929-2:mirbase
Length = 89
Score = 73.8 bits (37), Expect = 2e-14
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
Query: 82 a 82
|
Sbjct: 76 a 76
>37809_tca-mir-929:mirbase
Length = 103
Score = 61.9 bits (31), Expect = 7e-11
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccttt--tattgagcgactccctaacggagtcagatt 79
||||||||||||||||||||||||| || | | |||||||||||||||||||||| ||
Sbjct: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
Query: 80 ga 81
||
Sbjct: 82 ga 83
>37810_tca-mir-929:mirbase
Length = 103
Score = 61.9 bits (31), Expect = 7e-11
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccttt--tattgagcgactccctaacggagtcagatt 79
||||||||||||||||||||||||| || | | |||||||||||||||||||||| ||
Sbjct: 22 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 81
Query: 80 ga 81
||
Sbjct: 82 ga 83
>35089_api-mir-929:mirbase
Length = 60
Score = 58.0 bits (29), Expect = 1e-09
Identities = 53/60 (88%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccttttattga--gcgactccctaacggagtcagattga 81
||||||||||||||||||||||||| |||| | | |||||||||| || ||||||||||
Sbjct: 1 aaattgactctagtagggagtccttatatttaatgtgactccctaatggggtcagattga 60
>35401_ame-mir-929:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>37595_ngi-mir-929:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>37625_nlo-mir-929:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>37673_nvi-mir-929:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||
Sbjct: 13 tcaaattgactctagtagggagtcc 37
>35572_bmo-mir-929:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtcc 46
|||||||||||||||||||||||
Sbjct: 5 aaattgactctagtagggagtcc 27
